Pre_GI: BLASTP Hits

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Query: NC_015761:4355335:4377582 Salmonella bongori NCTC 12419, complete genome

Start: 4377582, End: 4378316, Length: 735

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:474932047493204750054735Salmonella enterica subsp. enterica serovar Paratyphi C strainaspartate racemase9e-121432
NC_006905:4638707:467200546720054672739735Salmonella enterica subsp. enterica serovar Choleraesuis strputative aspartate racemase9e-121432
NC_014618:4657719:468570046857004686434735Enterobacter cloacae SCF1 chromosome, complete genomeaspartate racemase2e-103375
NC_010498:1094000:110588911058891106608720Escherichia coli SMS-3-5, complete genomeaspartate racemase2e-61235
NC_014500:1646854:166670616667061667422717Dickeya dadantii 3937 chromosome, complete genomeputative aspartate racemase7e-50197
NC_002929:52500:536235362354357735Bordetella pertussis Tohama I, complete genomeputative aspartate/glutamate racemase9e-32137
NC_017223:51180:536235362354357735Bordetella pertussis CS chromosome, complete genomeputative aspartate/glutamate racemase9e-32137
NC_007948:4620661:462609346260934626818726Polaromonas sp. JS666, complete genomeAspartate racemase6e-32137
NC_000961:597385:597385597385598071687Pyrococcus horikoshii OT3, complete genomeaspartate racemase2e-31135
NC_009142:5647737:565601356560135656768756Saccharopolyspora erythraea NRRL 2338, complete genomeaspartate racemase1e-29130
NC_011295:1120584:112754711275471128266720Coprothermobacter proteolyticus DSM 5265, complete genomeaspartate racemase9e-29127
NC_013421:1954915:195752019575201958236717Pectobacterium wasabiae WPP163, complete genomeaspartate racemase2e-28125
NC_016830:4639388:4645685464568546471811497Pseudomonas fluorescens F113 chromosome, complete genomeaspartate racemase3e-26119
NC_015677:1460000:146540814654081466145738Ramlibacter tataouinensis TTB310 chromosome, complete genomeaspartate racemase8e-25114
NC_017190:466236:479815479815480495681Bacillus amyloliquefaciens LL3 chromosome, complete genomeamino acid racemase1e-1686.7
NC_014551:483773:493886493886494566681Bacillus amyloliquefaciens DSM 7, complete genomeamino acid racemase1e-1686.7
NC_020272:3396800:342665734266573427337681Bacillus amyloliquefaciens IT-45, complete genomeaspartate racemase8e-1684
NC_017191:467207:487387487387488067681Bacillus amyloliquefaciens XH7 chromosome, complete genomeamino acid racemase1e-1583.6
NC_017188:461177:481365481365482045681Bacillus amyloliquefaciens TA208 chromosome, complete genomeaspartate racemase1e-1583.6
NC_020410:495184:514630514630515310681Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative amino-acid racemase4e-1581.6
NC_019842:484933:522218522218522898681Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,aspartate racemase8e-1580.9
NC_019942:987134:101040910104091011083675Aciduliprofundum sp. MAR08-339, complete genomeaspartate racemase1e-1480.1
NC_009725:496443:528210528210528890681Bacillus amyloliquefaciens FZB42, complete genomeRacX5e-1478.2
NC_020410:2509057:251292025129202513618699Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePutative aspartate racemase3e-1375.5
NC_003413:1521080:155854015585401559235696Pyrococcus furiosus DSM 3638, complete genomeputative aspartate racemase6e-1374.7
NC_014551:2510000:254602625460262546724699Bacillus amyloliquefaciens DSM 7, complete genomeAspartate racemase7e-1374.3
NC_013926:829665:834044834044834721678Aciduliprofundum boonei T469 chromosome, complete genomeaspartate racemase1e-1170.1
NC_016609:6750111:678376867837686784457690Niastella koreensis GR20-10 chromosome, complete genomeaspartate racemase6e-1167.8
NC_008392:1029134:105709610570961057800705Burkholderia cepacia AMMD chromosome 3, complete sequenceaspartate racemase1e-1067
NC_011883:1182000:119259811925981193314717Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,aspartate racemase3e-1065.9
NC_010557:679656:725608725608726225618Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceaspartate racemase4e-1065.1
NC_013192:1824174:182969618296961830391696Leptotrichia buccalis DSM 1135, complete genomeaspartate racemase5e-1064.7
NC_015500:159199:176739176739177431693Treponema brennaborense DSM 12168 chromosome, complete genomeaspartate racemase8e-1064.3
NC_013665:415998:434716434716435417702Methanocella paludicola SANAE, complete genomeaspartate racemase2e-0963.2
NC_013517:4208939:423640342364034237098696Sebaldella termitidis ATCC 33386, complete genomeaspartate racemase6e-0961.2
NC_016048:3611146:362779336277933628488696Oscillibacter valericigenes Sjm18-20, complete genomeaspartate racemase6e-0961.2
NC_014011:1264165:127799512779951278681687Aminobacterium colombiense DSM 12261 chromosome, complete genomeaspartate racemase6e-0961.2
NC_009348:3819271:384248838424883843207720Aeromonas salmonicida subsp. salmonicida A449, complete genomeaspartate racemase7e-0961.2
NC_015556:515641:524448524448525146699Pseudomonas fulva 12-X chromosome, complete genomeaspartate racemase1e-0860.1
NC_015681:401084:407809407809408528720Thermodesulfatator indicus DSM 15286 chromosome, complete genomeaspartate racemase1e-0860.1
NC_013446:2062862:207646020764602077155696Comamonas testosteroni CNB-2, complete genomeaspartate racemase2e-0859.7
NC_009712:2092440:210683321068332107555723Candidatus Methanoregula boonei 6A8, complete genomeaspartate racemase2e-0859.7
NC_021182:554000:564461564461565159699Clostridium pasteurianum BC1, complete genomeaspartate racemase6e-0857.8
NC_021182:2536000:255080925508092551507699Clostridium pasteurianum BC1, complete genomeaspartate racemase6e-0857.8
NC_014006:924417:936197936197936892696Sphingobium japonicum UT26S chromosome 1, complete genomeputative aspartate/glutamate racemase7e-0857.8
NC_011026:1681852:169944916994491700183735Chloroherpeton thalassium ATCC 35110, complete genomeaspartate racemase3e-0755.8
NC_007086:2887875:296496129649612965665705Xanthomonas campestris pv. campestris str. 8004, complete genomeputative resistance protein1e-0653.5
NC_011751:3285646:3286568328656832876351068Escherichia coli UMN026 chromosome, complete genomeputative racemase4e-0651.6
NC_002655:3769643:376964337696433770335693Escherichia coli O157:H7 EDL933, complete genomeputative resistance proteins7e-0650.8
NC_011750:3407500:340847734084773409169693Escherichia coli IAI39 chromosome, complete genomeputative racemase9e-0650.8
NC_007948:5026122:504146750414675042198732Polaromonas sp. JS666, complete genomeAspartate racemase1e-0550.4