Pre_GI: BLASTP Hits

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Query: NC_015761:4355335:4370463 Salmonella bongori NCTC 12419, complete genome

Start: 4370463, End: 4371458, Length: 996

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010163:614634:627377627377628363987Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein2e-1790.1
NC_009778:567000:5851635851635863501188Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-29130
NC_007722:2954876:2977731297773129788671137Erythrobacter litoralis HTCC2594, complete genomehypothetical protein4e-31135
NC_004431:5123325:512822251282225128935714Escherichia coli CFT073, complete genomehypothetical protein2e-106386
NC_004431:5123325:513024951302495130578330Escherichia coli CFT073, complete genomehypothetical protein3e-32139
NC_013364:5255700:526457152645715265257687Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-107388
NC_013364:5255700:526538552653855265567183Escherichia coli O111:H- str. 11128, complete genome2e-1894
NC_010498:4899167:490569749056974906695999Escherichia coli SMS-3-5, complete genomehypothetical protein9e-145513
NC_014366:1435785:1439570143957014407541185Gamma proteobacterium HdN1, complete genomehypothetical protein4e-31135
NC_015666:252740:2893582893582904011044Halopiger xanaduensis SH-6 chromosome, complete genomehypothetical protein8e-1168.2
NC_009975:1712577:1726351172635117274271077Methanococcus maripaludis C6, complete genomehypothetical protein1e-1997.4
NC_020418:116500:1240131240131251761164Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-27122
NC_014840:76232:8361183611846121002Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceputative inner membrane protein3e-137488
NC_010102:4745949:476272347627234763718996Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-177620
NC_008322:2077628:210396821039682104846879Shewanella sp. MR-7, complete genomehypothetical protein3e-30132
NC_014410:482193:4963794963794973891011Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hypothetical protein7e-1581.6
NC_015633:2801321:280584628058462806841996Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein3e-121434
NC_004603:370320:386475386475387212738Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative inner membrane protein8e-82303