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Query: NC_015761:4355335:4369556 Salmonella bongori NCTC 12419, complete genome

Start: 4369556, End: 4370164, Length: 609

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:4687270:470440647044064705014609Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-90330
NC_011294:4560902:458505445850544585662609Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-90329
NC_011080:4703266:472689447268944727502609Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein7e-90329
NC_010102:4745949:476188547618854762493609Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-90329
NC_011147:4460726:449397844939784494586609Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-89328
NC_011274:4538722:456287245628724563480609Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-89327
NC_012125:4716000:474248547424854743093609Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-89327
NC_011205:4718239:474237947423794742987609Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein7e-89326
NC_006905:4638707:466517046651704665778609Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-88325
NC_011415:308825:315173315173315781609Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-87320
NC_016832:4425330:443335044333504433892543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-72271
NC_012125:4536383:454440245444024544944543Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-72271
NC_003198:4453457:446147744614774462019543Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-72271