Pre_GI: BLASTP Hits

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Query: NC_015761:4355335:4368757 Salmonella bongori NCTC 12419, complete genome

Start: 4368757, End: 4369014, Length: 258

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:4560902:458430945843094584566258Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-35145
NC_011274:4538722:456212745621274562384258Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein7e-35145
NC_011147:4460726:449323244932324493489258Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-35145
NC_004631:4687270:470366147036614703918258Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-35145
NC_010102:4745949:476114047611404761397258Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-35145
NC_015663:3586836:359307135930713593328258Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-34144
NC_011080:4703266:472615047261504726407258Salmonella enterica subsp. enterica serovar Newport str. SL254,protein YjhX2e-34144
NC_006905:4638707:466442546644254664682258Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-34144
NC_011205:4718239:474163547416354741892258Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-34144
NC_012125:4716000:474174047417404741997258Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-34144
NC_016514:506611:531510531510531767258Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-34144
NC_014121:1101093:112371311237131123970258Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-34143
NC_014500:443874:465598465598465855258Dickeya dadantii 3937 chromosome, complete genomehypothetical protein3e-33140
AC_000091:4534935:453847645384764538733258Escherichia coli W3110 DNA, complete genomehypothetical protein7e-32135
NC_011751:5070597:507195650719565072213258Escherichia coli UMN026 chromosome, complete genomehypothetical protein7e-32135
NC_010473:4630361:463362746336274633884258Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein7e-32135
NC_000913:4528278:453181945318194532076258Escherichia coli K12, complete genomehypothetical protein7e-32135
NC_011742:4873351:487661748766174876874258Escherichia coli S88 chromosome, complete genomehypothetical protein7e-32135
NC_012759:4467288:447055444705544470811258Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-32135
NC_012947:3883484:389991738999173900174258Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-32135
NC_012967:4510393:451393445139344514191258Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein7e-32135
NC_007645:3870466:388436638843663884623258Hahella chejuensis KCTC 2396, complete genomehypothetical protein1e-23108
NC_020211:1655826:165582616558261656083258Serratia marcescens WW4, complete genomehypothetical protein2e-22104
NC_002516:776787:783576783576783833258Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-22103
NC_009832:1664238:167020216702021670459258Serratia proteamaculans 568, complete genomehypothetical protein7e-22102
NC_008095:2031997:204638320463832046679297Myxococcus xanthus DK 1622, complete genomehypothetical protein6e-1166.2