Pre_GI: BLASTP Hits

Some Help

Query: NC_015761:299386:347823 Salmonella bongori NCTC 12419, complete genome

Start: 347823, End: 348167, Length: 345

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:5319497:533936353393635339719357Escherichia coli O26:H11 str. 11368 chromosome, complete genomenegative regulator GrlR1e-1685.1
NC_013353:3669500:370416237041623704518357Escherichia coli O103:H2 str. 12009, complete genomenegative regulator GrlR2e-1684.3
AP010958:3669500:370416237041623704518357Escherichia coli O103:H2 str. 12009 DNA, complete genomenegative regulator GrlR2e-1684.3
NC_002655:4653160:468321846832184683589372Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-1682.4
NC_002695:4584177:461423546142354614606372Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-1682.4
NC_011353:4688000:471733947173394717710372Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenegative regulator GrlR9e-1682.4
NC_013008:4643825:467338046733804673751372Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenegative regulator GrlR9e-1682.4
NC_013941:4470932:450173945017394502110372Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-1682.4
NC_011601:4096427:412800141280014128372372Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomenegative regulator GrlR8e-1682.4
NC_013364:3701895:374564237456423746013372Escherichia coli O111:H- str. 11128, complete genomenegative regulator GrlR7e-1682.4
NC_014837:1570500:158356315835631583883321Pantoea sp. At-9b chromosome, complete genomehypothetical protein1e-1375.1