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Query: NC_015761:299386:337887 Salmonella bongori NCTC 12419, complete genome

Start: 337887, End: 338915, Length: 1029

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:1040381:1059494105949410605191026Enterobacter cloacae SCF1 chromosome, complete genometype II secretion system F domain-containing protein1e-97356
NC_017047:4379989:4392990439299043940361047Rahnella aquatilis HX2 chromosome, complete genometype II secretion system F domain-containing protein3e-88325
NC_015061:4286000:4299104429910443001501047Rahnella sp. Y9602 chromosome, complete genomeType II secretion system F domain protein3e-88325
NC_020063:528296:5427715427715438051035Enterobacteriaceae bacterium strain FGI 57, complete genometype II secretory pathway, component PulF9e-87320
NC_012668:2744393:2765141276514127661631023Vibrio cholerae MJ-1236 chromosome 1, complete sequencetoxin co-regulated pilus biosynthesis protein E anchors TcpT to membrane7e-56218
NC_009457:351512:3883813883813894031023Vibrio cholerae O395 chromosome 2, complete sequencetoxin co-regulated pilus biosynthesis protein E7e-56218
NC_005126:2063667:2077196207719620782931098Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0653.9