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Query: NC_015761:299386:333055 Salmonella bongori NCTC 12419, complete genome

Start: 333055, End: 334503, Length: 1449

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:1040381:1054655105465510561121458Enterobacter cloacae SCF1 chromosome, complete genometype IV pilus biogenesis protein3e-149528
NC_017047:4379989:4388118438811843895661449Rahnella aquatilis HX2 chromosome, complete genometype II and III secretion system protein5e-139494
NC_015061:4286000:4294232429423242956801449Rahnella sp. Y9602 chromosome, complete genometype II and III secretion system protein5e-139494
NC_020063:528296:5377655377655392101446Enterobacteriaceae bacterium strain FGI 57, complete genometype II secretory pathway, component PulD1e-132473
NC_013716:4885776:4903603490360349050721470Citrobacter rodentium ICC168, complete genomeputative Type IV pilus biogenesis protein1e-132473
NC_009457:351512:3836903836903851591470Vibrio cholerae O395 chromosome 2, complete sequencetoxin co-regulated pilus biosynthesis outer membrane protein C3e-40166
NC_012668:2744393:2769385276938527708541470Vibrio cholerae MJ-1236 chromosome 1, complete sequencetoxin co-regulated pilus biosynthesis protein C1e-39164