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Query: NC_015761:299386:332562 Salmonella bongori NCTC 12419, complete genome

Start: 332562, End: 333035, Length: 474

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:528296:537339537339537749411Enterobacteriaceae bacterium strain FGI 57, complete genomeToxin co-regulated pilus biosynthesis protein Q2e-2098.2
NC_013716:4885776:490316449031644903595432Citrobacter rodentium ICC168, complete genomeputative Type IV pilus biogenesis protein4e-2097.1
NC_014618:1040381:105420810542081054636429Enterobacter cloacae SCF1 chromosome, complete genometype IV pilus biogenesis protein2e-1891.7
NC_015061:4286000:429376842937684294208441Rahnella sp. Y9602 chromosome, complete genometype IV pilus biogenesis protein6e-1786.7
NC_017047:4379989:438784343878434388094252Rahnella aquatilis HX2 chromosome, complete genometype IV pilus biogenesis protein2e-1581.3