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Query: NC_015761:299386:330060 Salmonella bongori NCTC 12419, complete genome

Start: 330060, End: 330806, Length: 747

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:1040381:105183210518321052554723Enterobacter cloacae SCF1 chromosome, complete genomeToxin-coregulated pilus subunit TcpA5e-39161
NC_013716:4885776:490041549004154901131717Citrobacter rodentium ICC168, complete genomeputative Type IV pilin8e-29127
NC_017047:4379989:438513443851344385832699Rahnella aquatilis HX2 chromosome, complete genomeToxin-coregulated pilus subunit TcpA1e-27123
NC_015061:4286000:429124842912484291946699Rahnella sp. Y9602 chromosome, complete genomeToxin-coregulated pilus subunit TcpA1e-27123
NC_020063:528296:534555534555535268714Enterobacteriaceae bacterium strain FGI 57, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein1e-26120
NC_009457:351512:381188381188381862675Vibrio cholerae O395 chromosome 2, complete sequencetoxin co-regulated pilin1e-1480.5
NC_012668:2744393:277268127726812773355675Vibrio cholerae MJ-1236 chromosome 1, complete sequencetoxin co-regulated pilin A1e-1170.1