Pre_GI: BLASTP Hits

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Query: NC_015761:299386:324622 Salmonella bongori NCTC 12419, complete genome

Start: 324622, End: 325269, Length: 648

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012912:1053618:108453310845331085180648Dickeya zeae Ech1591, complete genomehypothetical protein3e-106384
NC_008752:166877:177370177370178008639Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein4e-70264
NC_015573:1573621:158418615841861584833648Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein1e-57222
NC_005125:3570385:358084835808483581432585Gloeobacter violaceus PCC 7421, complete genomehypothetical protein7e-38157