Pre_GI: BLASTP Hits

Some Help

Query: NC_015761:299386:320927 Salmonella bongori NCTC 12419, complete genome

Start: 320927, End: 321172, Length: 246

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010498:301000:316344316344316580237Escherichia coli SMS-3-5, complete genome1e-1995.1
NC_020181:5130513:513512351351235135356234Enterobacter aerogenes EA1509E, complete genomehypothetical protein5e-1992.8
NC_014121:3776902:379141237914123791651240Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1890.1
NC_020260:882307:895014895014895253240Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-1890.1
NC_014618:4114004:412122141212214121457237Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein5e-1889.7
NC_004431:4319152:433703243370324337265234Escherichia coli CFT073, complete genomeHypothetical protein ykfF1e-1788.6
NC_011750:4775770:477774547777454777978234Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-1788.6
NC_011745:3405520:342194934219493422182234Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1788.6
NC_008118:56777:985699856998799231Yersinia pestis Nepal516 plasmid pMT, complete sequencehypothetical protein1e-1788.2
NC_005815:61148:859898598986219231Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completehypothetical protein1e-1788.2
NC_004838:51013:704277042770657231Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein1e-1788.2
NC_010158:92819:112221112221112451231Yersinia pestis Angola plasmid pMT-pPCP, complete sequencehypothetical protein1e-1788.2
NC_009378:106193:134661134661134891231Yersinia pestis Pestoides F plasmid MT, complete sequencehypothetical protein1e-1788.2
NC_016612:443398:457782457782458012231Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-1787
NC_007946:4875997:489229048922904892523234Escherichia coli UTI89, complete genomehypothetical protein YkfF3e-1787
NC_011750:4390000:441001844100184410251234Escherichia coli IAI39 chromosome, complete genomehypothetical protein4e-1786.7
NC_015663:1869000:187243718724371872688252Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein6e-1786.3
NC_011415:308825:325077325077325307231Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-1685.5
NC_008253:3161311:317172531717253171958234Escherichia coli 536, complete genomehypothetical protein YkfF3e-1683.6
NC_011274:311843:313021313021313296276Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-1682.4
NC_007414:56508:701877018770447261Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein1e-1582
NC_002128:35000:476394763947872234Escherichia coli O157:H7 str. Sakai plasmid pO157, completehypothetical protein1e-1582
NC_015063:1:133741337413616243Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequencehypothetical protein4e-1476.6
NC_011083:4547825:456911745691174569293177Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-1063.9