Pre_GI: BLASTP Hits

Some Help

Query: NC_015761:299386:301235 Salmonella bongori NCTC 12419, complete genome

Start: 301235, End: 301636, Length: 402

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:313540:317110317110317511402Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator Crl6e-65245
NC_007384:307013:310583310583310984402Shigella sonnei Ss046, complete genometranscriptional regulator of cryptic csgA gene for curli surface fibers6e-65245
NC_010498:301000:302373302373302774402Escherichia coli SMS-3-5, complete genomesigma factor-binding protein Crl4e-64242
NC_004431:364000:365957365957366358402Escherichia coli CFT073, complete genomeCurlin genes transcriptional activatory protein4e-63239
NC_011745:291422:292724292724293125402Escherichia coli ED1a chromosome, complete genomeDNA-binding transcriptional regulator Crl5e-63239
NC_007946:289425:290727290727291128402Escherichia coli UTI89, complete genomecrl transcriptional regulator5e-63239
NC_008563:287136:290706290706291107402Escherichia coli APEC O1, complete genomecrl transcriptional regulator5e-63239
NC_013716:357928:359230359230359631402Citrobacter rodentium ICC168, complete genomesigma factor-binding protein crl (curlin genes transcriptional activator)4e-59226
NC_020063:3690308:374573937457393746140402Enterobacteriaceae bacterium strain FGI 57, complete genomeTranscriptional regulator Crl1e-56218
NC_014618:3700640:371637437163743716775402Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Crl9e-57218
NC_016514:891772:895332895332895757426Enterobacter cloacae EcWSU1 chromosome, complete genomeSigma factor-binding protein crl7e-57218
NC_020211:996497:100036710003671000768402Serratia marcescens WW4, complete genomesigma factor-binding protein1e-55214
NC_020260:3004500:302027230202723020661390Cronobacter sakazakii Sp291, complete genomeDNA-binding transcriptional regulator Crl6e-55212
NC_013282:923500:925567925567925956390Cronobacter turicensis, complete genomeSigma factor-binding protein crl1e-54211
NC_010634:1056441:107285910728591073260402Yersinia pseudotuberculosis PB1/+, complete genometranscriptional regulator Crl7e-50195
NC_010159:3502350:350598535059853506386402Yersinia pestis Angola, complete genometranscriptional activator Crl7e-50195
NC_005810:754340:770814770814771215402Yersinia pestis biovar Microtus str. 91001, complete genomeDNA-binding transcriptional regulator Crl7e-50195
NC_008149:1002453:101807710180771018478402Yersinia pestis Nepal516, complete genomecurlin genes regulatory protein7e-50195
NC_008150:3015000:301878130187813019182402Yersinia pestis Antiqua, complete genomecurlin genes regulatory protein7e-50195
NC_010465:3597000:359982735998273600228402Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator Crl7e-50195
NC_004088:1075454:109107810910781091479402Yersinia pestis KIM, complete genometranscriptional regulator of cryptic csgA gene for curli surface fibers7e-50195
NC_003143:3583468:358710335871033587504402Yersinia pestis CO92, complete genomecurlin genes regulatory protein7e-50195
NC_006155:1074298:109071610907161091117402Yersinia pseudotuberculosis IP 32953, complete genometranscriptional regulator of cryptic genes for curli formation and fibronectin binding7e-50195
NC_014029:3633955:363759036375903637991402Yersinia pestis Z176003 chromosome, complete genomecurlin genes regulatory protein7e-50195
NC_017154:3576256:357989135798913580292402Yersinia pestis D106004 chromosome, complete genomecurlin genes regulatory protein7e-50195
NC_017160:3560153:356378835637883564189402Yersinia pestis D182038 chromosome, complete genomecurlin genes regulatory protein7e-50195
NC_017168:2158839:217446321744632174864402Yersinia pestis A1122 chromosome, complete genomeDNA-binding transcriptional regulator Crl7e-50195
NC_017265:3375463:337873333787333379134402Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,DNA-binding transcriptional regulator7e-50195
NC_009708:3542336:354597135459713546372402Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeCrl family transcriptional regulator4e-49192
NC_009381:3228500:323136732313673231768402Yersinia pestis Pestoides F chromosome, complete genomeDNA-binding transcriptional regulator Crl1e-48191
NC_014121:1101093:110244311024431102754312Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-43172
NC_013508:876431:880255880255880656402Edwardsiella tarda EIB202, complete genomeDNA-binding transcriptional regulator7e-43172
NC_004547:3866439:388395338839533884327375Erwinia carotovora subsp. atroseptica SCRI1043, complete genomecurlin genes transcriptional activator7e-41165
NC_013421:3752619:376992237699223770296375Pectobacterium wasabiae WPP163, complete genometranscriptional regulator Crl1e-39161
NC_012917:3684840:370031837003183700692375Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator Crl2e-38157
NC_017328:303987:305418305418305690273Shigella flexneri 2002017 chromosome, complete genomeSigma factor-binding protein crl2e-37154