Pre_GI: BLASTP Hits

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Query: NC_015761:2982000:2985287 Salmonella bongori NCTC 12419, complete genome

Start: 2985287, End: 2986534, Length: 1248

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012724:2547500:2564083256408325653721290Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein3e-1996.7
NC_014355:1865003:1914600191460019158351236Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1274.3
NC_014355:1865003:1904219190421919054931275Candidatus Nitrospira defluvii, complete genomehypothetical protein5e-1272.8
NC_008095:2146693:2147726214772621490211296Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-0551.6