Pre_GI: BLASTP Hits

Some Help

Query: NC_015761:2444833:2450761 Salmonella bongori NCTC 12419, complete genome

Start: 2450761, End: 2451804, Length: 1044

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014837:3126543:3133518313351831345911074Pantoea sp. At-9b chromosome, complete genomehypothetical protein2e-76285
NC_005085:1498000:150056415005641501562999Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-23110
NC_014562:3985500:3993096399309639941271032Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein ypfG precursor1e-1480.9
NC_004547:843475:8515638515638526331071Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-1067.4
NC_021066:3703725:3708011370801137100982088Raoultella ornithinolytica B6, complete genomehypothetical protein1e-1067.4
NC_015663:1902344:1924474192447419265612088Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-1067
NC_013850:4993307:5020069502006950221562088Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF11761e-0757.4