Pre_GI: BLASTP Hits

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Query: NC_015761:2373967:2394134 Salmonella bongori NCTC 12419, complete genome

Start: 2394134, End: 2394376, Length: 243

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2492168:251284925128492513091243Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-35145
NC_011274:2483038:250374825037482503990243Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-35145
NC_011205:2621415:263993726399372640179243Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-35145
NC_003198:2453074:247369724736972473939243Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-35145
NC_007384:2587876:260820726082072608449243Shigella sonnei Ss046, complete genomehypothetical protein7e-24109
NC_007606:2353098:237227623722762372518243Shigella dysenteriae Sd197, complete genomehypothetical protein7e-24109
NC_004741:2456297:247624024762402476482243Shigella flexneri 2a str. 2457T, complete genomehypothetical protein7e-24109
AP010958:2911741:294604429460442946286243Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted inner membrane protein7e-24109
NC_010468:1412791:141579414157941416036243Escherichia coli ATCC 8739, complete genomehypothetical protein7e-24109
CP002185:2659628:267950626795062679748243Escherichia coli W, complete genomepredicted inner membrane protein7e-24109
CU928160:2513000:253195525319552532197243Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein7e-24109
NC_008258:2473000:249184224918422492084243Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-24109
NC_004337:2478461:249810224981022498344243Shigella flexneri 2a str. 301, complete genomehypothetical protein7e-24109
NC_010658:2529033:254974425497442549986243Shigella boydii CDC 3083-94, complete genomehypothetical protein7e-24109
CP002516:1419413:142610914261091426351243Escherichia coli KO11, complete genomehypothetical protein7e-24109
NC_017328:2516000:253574425357442535986243Shigella flexneri 2002017 chromosome, complete genomeinner membrane protein7e-24109
NC_016902:1419413:142610914261091426351243Escherichia coli KO11FL chromosome, complete genomehypothetical protein7e-24109
NC_016822:2678691:270028927002892700531243Shigella sonnei 53G, complete genomehypothetical protein7e-24109
NC_013353:2911741:294604429460442946286243Escherichia coli O103:H2 str. 12009, complete genomeinner membrane protein7e-24109
NC_012967:2409500:242927424292742429516243Escherichia coli B str. REL606 chromosome, complete genomeputative inner membrane protein7e-24109
NC_012947:1363724:136672713667271366969243Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-24109
NC_011741:2513000:253195525319552532197243Escherichia coli IAI1 chromosome, complete genomehypothetical protein7e-24109
NC_009800:2505872:252645225264522526694243Escherichia coli HS, complete genomehypothetical protein7e-24109
NC_009801:2639787:265855626585562658798243Escherichia coli E24377A, complete genomehypothetical protein1e-23108
NC_008253:2499735:251847825184782518720243Escherichia coli 536, complete genomehypothetical protein YfdY1e-23108
NC_011601:2614691:265145826514582651700243Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-23108
NC_011742:2533500:255194925519492552191243Escherichia coli S88 chromosome, complete genomehypothetical protein7e-24108
NC_013941:2928000:296425329642532964495243Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-23107
NC_011353:3276734:332729933272993327541243Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-23107
NC_007613:2376974:239697923969792397221243Shigella boydii Sb227, complete genomehypothetical protein4e-23106
NC_011745:2751437:276978827697882770030243Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-23106
NC_011740:810411:810411810411810659249Escherichia fergusonii ATCC 35469, complete genomehypothetical protein2e-22104
NC_020063:2230000:223638622363862236631246Enterobacteriaceae bacterium strain FGI 57, complete genomeProtein of unknown function (DUF2545)2e-0858.2