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Query: NC_015761:2373967:2379763 Salmonella bongori NCTC 12419, complete genome

Start: 2379763, End: 2380005, Length: 243

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:2898434:290521429052142905456243Citrobacter rodentium ICC168, complete genomehypothetical protein9e-39158
NC_019902:2372097:238815223881522388397246Thioalkalivibrio nitratireducens DSM 14787, complete genomehypothetical protein5e-1579.7
NC_018012:4184500:419195241919524192194243Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein6e-1166.2
NC_013508:3188978:324237732423773242616240Edwardsiella tarda EIB202, complete genomehypothetical protein1e-1065.1
NC_013889:1514799:152468915246891524934246Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein1e-1065.1
NC_014960:2371989:238679823867982387034237Anaerolinea thermophila UNI-1, complete genomehypothetical protein2e-1064.3
NC_014960:2638562:264237826423782642614237Anaerolinea thermophila UNI-1, complete genomehypothetical protein2e-1064.3
NC_010803:1132500:114669311466931146932240Chlorobium limicola DSM 245, complete genomehypothetical protein5e-0960.1
NC_002932:1798869:182202818220281822267240Chlorobium tepidum TLS, complete genomehypothetical protein5e-0959.7
NC_008740:2905990:292992629299262930156231Marinobacter aquaeolei VT8, complete genomehypothetical protein9e-0648.9