Pre_GI: BLASTP Hits

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Query: NC_015761:2373967:2373967 Salmonella bongori NCTC 12419, complete genome

Start: 2373967, End: 2377089, Length: 3123

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:1272448:1299079129907913018532775Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase4e-40167
NC_013892:3278647:3281299328129932824681170Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase (fragment)3e-23111
NC_014121:1101093:1113609111360911162962688Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completezinc-binding domain of primase-helicase family protein2e-20102
NC_011083:2542876:2556453255645325591402688Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,zinc-binding domain of primase-helicase family3e-20101
NC_015061:1251905:1265618126561812682932676Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-1998.6
NC_013892:671000:6938526938526965482697Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase7e-1997.1
CP002797:2472908:2472908247290824755952688Escherichia coli NA114, complete genomeputative phage protein6e-1997.1
NC_013956:4326388:4327056432705643297282673Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha9e-1996.7
NC_015224:3291736:3306358330635833090422685Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Zinc-binding domain of primase-helicase family2e-1895.1
NC_011740:810411:8262408262408289122673Escherichia fergusonii ATCC 35469, complete genomePutative inner membrane protein (modular protein) from phage origin3e-1894.7
NC_011094:380428:3832303832303859022673Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-1894.4
NC_013592:4295449:4298421429842143004662046Dickeya dadantii Ech586, complete genomeP4 alpha zinc-binding domain protein7e-1893.6
NC_015968:3301958:3325863332586333285352673Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein1e-1793.2
NC_009381:2939782:295467529546752955634960Yersinia pestis Pestoides F chromosome, complete genomeprophage DNA primase1e-1792.4
NC_012912:4194821:4195622419562241976672046Dickeya zeae Ech1591, complete genomeP4 alpha zinc-binding domain protein3e-1791.7
NC_003143:1233128:123682512368251237784960Yersinia pestis CO92, complete genomeputative prophage DNA primase3e-1791.7
NC_008149:3251196:326609032660903267049960Yersinia pestis Nepal516, complete genomeprophage DNA primase3e-1791.7
NC_008150:650899:653561653561654520960Yersinia pestis Antiqua, complete genomeputative prophage DNA primase3e-1791.7
NC_010159:1417993:142097714209771421936960Yersinia pestis Angola, complete genome3e-1791.7
NC_017168:4155143:415884141588414159800960Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-1791.7
NC_017265:1136000:113815511381551139114960Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative prophage DNA primase3e-1791.7
NC_004088:3382148:339701133970113398000990Yersinia pestis KIM, complete genomehypothetical protein4e-1791.3
NC_005810:1130251:114511511451151146104990Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-1791.3
NC_009778:2951207:2967702296770229701372436Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1689.7
NC_014029:1283500:128602212860221286777756Yersinia pestis Z176003 chromosome, complete genomeputative prophage DNA primase9e-1789.7
NC_017154:1225500:122811512281151228870756Yersinia pestis D106004 chromosome, complete genomeputative prophage DNA primase9e-1789.7
NC_017160:1507500:152274115227411523496756Yersinia pestis D182038 chromosome, complete genomeputative prophage DNA primase9e-1789.7
NC_012880:4117376:4117865411786541199102046Dickeya dadantii Ech703, complete genomeP4 alpha zinc-binding domain protein3e-1688.6
NC_012880:2778795:2782217278221727848532637Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF9276e-1687.4
NC_014500:443874:4601454601454621902046Dickeya dadantii 3937 chromosome, complete genomeDNA primase2e-1585.5
NC_010694:2716348:2731726273172627345542829Erwinia tasmaniensis, complete genomePutative prophage primase3e-1584.7
NC_015566:4350080:4373105437310543752132109Serratia sp. AS12 chromosome, complete genomehypothetical protein4e-1584.3
NC_014500:3744705:3757707375770737603432637Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC9e-1583.2
CU928145:299080:3023023023023044342133Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-1483.2
NC_011748:299080:3023023023023044342133Escherichia coli 55989, complete genomehypothetical protein1e-1483.2
NC_013592:2703327:2707294270729427099932700Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF9272e-1482
NC_014500:2019113:2039592203959220423602769Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC5e-1480.9
NC_009256:2725836:2727734272773427301272394Burkholderia vietnamiensis G4 chromosome 1, complete sequenceTOPRIM domain-containing protein5e-1480.9
NC_011083:2847318:2858008285800828600772070Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein7e-1480.5
NC_003197:2870268:2883501288350128855702070Salmonella typhimurium LT2, complete genomeputative inner membrane protein7e-1480.5
NC_016810:2871689:2906066290606629081352070Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein7e-1480.5
NC_016856:2896630:2903726290372629057952070Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein7e-1480.5
NC_016857:2871689:2906066290606629081352070Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein7e-1480.5
NC_016860:2896254:2907067290706729091362070Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein7e-1480.5
NC_016863:2844883:2851979285197928540482070Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein7e-1480.5
NC_017046:2896651:2904808290480829068772070Salmonella enterica subsp. enterica serovar Typhimurium str. 798inner membrane protein7e-1480.5
NC_011094:638552:6579916579916601322142Salmonella enterica subsp. enterica serovar Schwarzengrund strP4 alpha zinc-binding domain-containing protein2e-1379
NC_011751:3048490:3054619305461930566882070Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1276.6
NC_007712:2806500:281257128125712813332762Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1275.9
NC_014614:2643203:2651210265121026530631854Clostridium sticklandii, complete genomehypothetical protein3e-1275.1
NC_015381:992401:1007868100786810106602793Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-1172.4
NC_016830:5031819:5038640503864050408592220Pseudomonas fluorescens F113 chromosome, complete genomevirulence-associated e family protein3e-1171.6
NC_002663:1988000:2004283200428320064602178Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein5e-1170.9
NC_014922:1360000:1361398136139813635902193Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein6e-1170.5
NC_010511:915313:9192619192619220532793Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein9e-1170.1
NC_007434:1322500:1346373134637313492342862Burkholderia pseudomallei 1710b chromosome I, complete sequenceinner membrane protein2e-1068.9
UCMB5137:140766:1613951613951638092415Bacillus atrophaeus UCMB-5137hypothetical protein3e-1068.6
NC_006351:520500:5228525228525257192868Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein7e-1067
NC_005085:4157257:4161249416124941629791731Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein8e-1067
NC_004632:28470:4292242922475954674Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,DNA primase TraC1e-0966.2
NC_004129:2201780:2215930221593022181672238Pseudomonas fluorescens Pf-5, complete genomeDNA primase domain protein1e-0966.2
NC_008390:2643653:2653394265339426557872394Burkholderia cepacia AMMD chromosome 1, complete sequenceTOPRIM domain protein2e-0965.9
NC_007712:4023516:4054746405474640557921047Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0965.5
NC_007650:2429307:2455275245527524581422868Burkholderia thailandensis E264 chromosome II, complete sequenceDNA primase4e-0964.7
NC_009074:94000:9434694346971982853Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein4e-0964.7
NC_012724:3222415:3224293322429332271692877Burkholderia glumae BGR1 chromosome 1, complete genomeInner membrane protein5e-0964.3
NC_012917:833721:8345098345098368362328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family6e-0963.9
NC_010508:2776283:2778117277811727809782862Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencePrimase 26e-0963.9
NC_009256:458649:4586494586494615252877Burkholderia vietnamiensis G4 chromosome 1, complete sequenceinner membrane protein6e-0963.9
NC_008060:1945597:1947208194720819500842877Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceinner membrane protein1e-0863.2
NC_008542:2631138:2632749263274926356252877Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceinner membrane protein1e-0863.2
NC_009076:106807:1102561102561131082853Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein1e-0862.8
NC_002951:49535:4953549535513041770Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein2e-0862
NC_004578:3849835:3854392385439238566112220Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA primase domain protein4e-0861.2
NC_013740:2141523:2151888215188821545662679Acidaminococcus fermentans DSM 20731, complete genomeprotein of unknown function DUF9275e-0860.8
NC_017033:2081206:2102598210259821043941797Frateuria aurantia DSM 6220 chromosome, complete genomeDNA/RNA helicase6e-0860.5
NC_012917:3684840:3686089368608936884162328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family9e-0860.1
NC_015221:12389:3452534525374162892Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencehypothetical protein1e-0759.7
NC_016026:2170500:2181687218168721836962010Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein1e-0759.7
NC_014624:1235818:1241220124122012431031884Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-0758.5
NC_014624:2944437:2955376295537629572591884Eubacterium limosum KIST612 chromosome, complete genomeSuperfamily II helicase and inactivated derivatives-like3e-0758.5
NC_016026:2170500:218366521836652184543879Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein3e-0758.5
NC_015676:1530000:1539899153989915424302532Methanosalsum zhilinae DSM 4017 chromosome, complete genomehypothetical protein4e-0758.2
NC_012660:165559:1966251966251995132889Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-0757.8
NC_004129:5723787:5732718573271857356932976Pseudomonas fluorescens Pf-5, complete genomehypothetical protein7e-0757
NC_013209:867500:8854638854638880242562Acetobacter pasteurianus IFO 3283-01, complete genomeDNA/RNA helicase7e-0757
NC_017100:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-03, complete genomeDNA/RNA helicase7e-0757
NC_017108:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-12, complete genomeDNA/RNA helicase7e-0757
NC_017111:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-32, complete genomeDNA/RNA helicase7e-0757
NC_017121:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-07, complete genomeDNA/RNA helicase7e-0757
NC_017125:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-22, complete genomeDNA/RNA helicase7e-0757
NC_017146:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-26, complete genomeDNA/RNA helicase7e-0757
NC_012751:942315:9547339547339572192487Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeDNA primase TraC1e-0656.6
NC_015136:2021799:2045288204528820481372850Burkholderia sp. CCGE1001 chromosome 1, complete sequenceToprim sub domain-containing protein1e-0656.2
NC_016048:3947663:3944818394481839476852868Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein7e-0653.5
NC_012559:2353236:2357067235706723588361770Laribacter hongkongensis HLHK9, complete genomeputative prophage primase1e-0553.1