Pre_GI: BLASTP Hits

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Query: NC_015761:2227500:2227868 Salmonella bongori NCTC 12419, complete genome

Start: 2227868, End: 2228533, Length: 666

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:1593543:161105716110571611692636Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG7e-26117
NC_013353:2134556:214412621441262144761636Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG7e-26117
AP010958:2134556:214412621441262144761636Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-like protein7e-26117
NC_013364:4990365:499803249980324998682651Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein3e-25115
NC_002655:3538656:354760535476053548255651Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-25114
NC_002695:3468873:347775634777563478406651Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-25114
NC_013008:3525428:353674135367413537391651Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector4e-25114
NC_013361:1896446:191590919159091916538630Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG1e-24113
NC_013941:338121:346007346007346633627Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePotB3e-24111
NC_002695:2158314:215944121594412160070630Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-22106
NC_002655:3538656:354952235495223550001480Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-22105
NC_013716:1756545:176490517649051765489585Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein NleG11e-21103
NC_002695:3468873:347967334796733480095423Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein7e-22103
NC_013364:4990365:499634349963434996765423Escherichia coli O111:H- str. 11128, complete genome7e-22103
NC_002655:1909139:192840019284001929029630Escherichia coli O157:H7 EDL933, complete genomehypothetical protein7e-22103
NC_013008:3525428:353865835386583539065408Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-21102
NC_011353:3573641:358378135837813584188408Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein3e-21102
AP010958:2134556:214221121422112142861651Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-like protein5e-21101
NC_013353:2134556:214221121422112142861651Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG5e-21101
NC_015761:1017301:103065610306561031234579Salmonella bongori NCTC 12419, complete genometype III secretion system effector protein4e-21101
NC_002655:1909139:192775219277521928327576Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-21101
NC_002695:2158314:216014321601432160718576Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-21101
NC_013361:1896446:191526119152611915836576Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG1e-2099.8
NC_013941:338121:344689344689345267579Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-2098.6
NC_013361:1593543:161040816104081610989582Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG1e-1996.3
NC_013941:1963523:196488119648811965531651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1996.3
NC_013364:863209:885263885263885598336Escherichia coli O111:H- str. 11128, complete genome4e-1994.7
NC_013361:1593543:160954216095421610117576Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleI/NleG1e-1893.2
NC_013941:1963523:196624219662421966817576Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1893.2
NC_013361:1754346:176223017622301762772543Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG2e-1892.8
NC_013008:1715831:172123717212371721767531Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1892.8
NC_002655:2264773:228597622859762286506531Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by cryptic prophage CP-933P2e-1892.8
NC_002655:1909139:192911119291111929752642Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1892.4
NC_002695:2158314:215871821587182159359642Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1892.4
NC_013716:5141269:515443051544305155059630Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein NleG73e-1892
NC_013361:1896446:191662019166201917261642Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG4e-1891.3
NC_002655:2264773:227568422756842276331648Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-1789.7
NC_002695:1794635:181084618108461811493648Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1789.7
NC_013008:1715831:173141217314121732059648Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector1e-1789.7
NC_013361:1754346:176996317699631770610648Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG1e-1789.7
NC_013364:1997891:200658620065862007233648Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein1e-1789.7
AP010958:867869:878563878563879138576Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-homolog1e-1789.7
NC_013353:867869:878563878563879138576Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG1e-1789.7
NC_013364:1997891:200365520036552004305651Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein2e-1789
NC_013361:1754346:177289117728911773541651Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG2e-1789
NC_011353:1716037:173243717324371732967531Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein3e-1788.6
NC_002655:2264773:227275322727532273262510Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-1787.8
NC_013364:2898964:290617629061762906709534Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein7e-1787.4
NC_013353:2134556:214484021448402145412573Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG9e-1787
AP010958:2134556:214484021448402145412573Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-like protein9e-1787
NC_011601:1077548:108440310844031084981579Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleI/NleG-like protein3e-1685.5
NC_013716:4306695:433002543300254330666642Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein NleG88e-1684
NC_013353:3669500:367720636772063677844639Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG4e-1478.2
AP010958:3669500:367720636772063677844639Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-homolog4e-1478.2