Pre_GI: BLASTP Hits

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Query: NC_015761:1970042:1973274 Salmonella bongori NCTC 12419, complete genome

Start: 1973274, End: 1974194, Length: 921

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1110642:113139511313951132315921Salmonella enterica subsp. enterica serovar Agona str. SL483,carboxylate/amino acid/amine transporter5e-140497
NC_016832:948029:986665986665987585921Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative inner membrane transporter yedA7e-140496
NC_004631:948054:988990988990989910921Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-140496
NC_016831:1865681:186568118656811866601921Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-139495
NC_016857:2027311:203053120305312031457927Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74inner membrane transporter yedA3e-139494
NC_017046:2026672:202989220298922030818927Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-139494
NC_016810:2027311:203053720305372031457921Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-139494
NC_016856:2085283:208437420843742085294921Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-139494
NC_016863:2029340:203256620325662033486921Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-139494
NC_011205:1227373:124520912452091246129921Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-138491
CU928160:2091249:209124920912492092169921Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein1e-126452
NC_010498:1210145:122891112289111229831921Escherichia coli SMS-3-5, complete genomecarboxylate/amino acid/amine transporter1e-126452
NC_011415:2248417:224750822475082248428921Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-126452
NC_011741:2091249:209124920912492092169921Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-126452
NC_013716:2139952:214104121410412141961921Citrobacter rodentium ICC168, complete genomehypothetical protein8e-126449
NC_011740:1991941:199194119919411992861921Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative inner membrane protein1e-123442
AC_000091:2027648:203167620316762032596921Escherichia coli W3110 DNA, complete genomepredicted inner membrane protein2e-119428
NC_010473:2119480:211857121185712119491921Escherichia coli str. K-12 substr. DH10B, complete genomepredicted inner membrane protein2e-119428
NC_000913:2028472:202756320275632028483921Escherichia coli K12, complete genomepredicted inner membrane protein2e-119428
NC_009801:2159123:215912321591232160043921Escherichia coli E24377A, complete genomecarboxylate/amino acid/amine transporter2e-119428
NC_009800:2049346:204934620493462050266921Escherichia coli HS, complete genomecarboxylate/amino acid/amine transporter2e-119428
NC_012759:1920955:192004619200461920966921Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-119428
NC_012947:1769438:180687818068781807798921Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-119428
NC_013008:2561586:256067725606772561597921Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-119428
NC_016902:1902431:192390819239081924837930Escherichia coli KO11FL chromosome, complete genomecarboxylate/amino acid/amine transporter1e-114412
CP002185:2181936:218101821810182181947930Escherichia coli W, complete genomepredicted inner membrane protein1e-114412
CP002516:1902431:192390819239081924837930Escherichia coli KO11, complete genomecarboxylate/amino acid/amine transporter1e-114412
NC_016612:5208936:521028652102865211197912Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative DMT superfamily transporter inner membrane protein4e-111401
NC_015663:4906652:490774749077474908658912Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative DMT superfamily transporter inner membrane protein1e-110399
NC_011283:1901229:192033319203331921244912Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-109395
NC_021066:601029:619153619153620064912Raoultella ornithinolytica B6, complete genomeDMT superfamily transporter inner membrane protein2e-107389
NC_014306:3006028:300739930073993008316918Erwinia billingiae Eb661, complete genomecarboxylate/amino acid/amine transporter8e-93340
NC_016822:2201388:220579522057952206337543Shigella sonnei 53G, complete genomeputative DMT superfamily transporter inner membrane protein1e-69263
NC_016822:2201388:220541622054162205775360Shigella sonnei 53G, complete genomeputative DMT superfamily transporter inner membrane protein2e-39162
NC_008314:1955793:196031119603111961213903Ralstonia eutropha H16 chromosome 2, complete sequenceTransmembrane protein1e-31137
NC_014761:2248000:226086222608622261734873Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein3e-28125
NC_013132:3605317:360441936044193605336918Chitinophaga pinensis DSM 2588, complete genomeprotein of unknown function DUF6 transmembrane9e-26117
NC_015064:649201:652668652668653618951Acidobacterium sp. MP5ACTX9 chromosome, complete genomeprotein of unknown function DUF6 transmembrane1e-25117
NC_013947:1011899:1012447101244710140061560Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptide methionine sulfoxide reductase9e-25114
NC_014655:1098428:111623111162311117145915Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein4e-1789
NC_015589:2447132:246711424671142468061948Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein9e-1271.2
NC_014622:1514416:151441615144161515327912Paenibacillus polymyxa SC2 chromosome, complete genomepermease, drug/metabolite transporter superfamily4e-1065.9
NC_014483:1376500:137660913766091377520912Paenibacillus polymyxa E681 chromosome, complete genomePermease of the drug/metabolite transporter (DMT) superfamily4e-1065.9
NC_014221:591785:614960614960615919960Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF6 transmembrane1e-0860.5
NC_002516:2306776:231289923128992313789891Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-0860.5
NC_012962:1364638:138096413809641381878915Photorhabdus asymbiotica, complete genomeputative integral membrane protein precursor3e-0756.2
NC_009832:2211154:224124422412442242188945Serratia proteamaculans 568, complete genomeprotein of unknown function DUF6 transmembrane7e-0754.7
NC_014828:1632000:163987016398701640805936Ethanoligenens harbinense YUAN-3 chromosome, complete genomeprotein of unknown function DUF6 transmembrane1e-0654.3
NC_019842:3921424:393535939353593936270912Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,permease1e-0653.9
NC_020272:20435:284262842629337912Bacillus amyloliquefaciens IT-45, complete genomepermease1e-0653.9
NC_003198:1867456:188100418810041881918915Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-0653.5
NC_004631:1091303:109921410992141100128915Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-0653.5
NC_016832:1090274:109818510981851099099915Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative transporter2e-0653.5
NC_010678:114000:133925133925134842918Ralstonia pickettii 12J chromosome 2, complete sequenceprotein of unknown function DUF6 transmembrane2e-0653.5
NC_012857:557911:577719577719578636918Ralstonia pickettii 12D chromosome 2, complete genomeprotein of unknown function DUF6 transmembrane2e-0653.5
NC_006511:1063249:108174710817471082661915Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-0653.5
NC_011147:1057259:107575710757571076671915Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-0653.5
NC_016857:1903426:191707519170751917989915Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74integral membrane protein2e-0653.1
NC_016856:1957263:197091219709121971826915Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sintegral membrane protein2e-0653.1
NC_016810:1903426:191707519170751917989915Salmonella enterica subsp. enterica serovar Typhimurium strinner membrane protein (PagO)2e-0653.1
NC_011083:1993672:200733120073312008245915Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein PagO2e-0653.1
NC_003197:1945858:195950719595071960421915Salmonella typhimurium LT2, complete genomeintegral membrane protein2e-0653.1
NC_007604:1967770:1992369199236919934631095Synechococcus elongatus PCC 7942, complete genomepermease of the drug/metabolite transporter3e-0653.1
NC_016860:1943203:195685219568521957766915Salmonella enterica subsp. enterica serovar Typhimurium strprotein PagO2e-0653.1
NC_016863:1905454:191910319191031920017915Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1integral membrane protein2e-0653.1
NC_011080:1944226:196451419645141965428915Salmonella enterica subsp. enterica serovar Newport str. SL254,protein PagO2e-0653.1
NC_016831:1690811:170444717044471705361915Salmonella enterica subsp. enterica serovar Gallinarum/pulloruminner membrane protein (PagO)2e-0653.1
NC_012125:1897611:191576319157631916677915Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0653.1
NC_011294:1220526:125536712553671256281915Salmonella enterica subsp. enterica serovar Enteritidis strinner membrane protein PagO2e-0653.1
NC_011274:1299475:131955513195551320469915Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91inner membrane protein PagO2e-0653.1
NC_010102:1137247:115928411592841160198915Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0653.1
NC_006905:1961774:197604919760491976963915Salmonella enterica subsp. enterica serovar Choleraesuis strPhoPQ-activated gene; predicted integral membrane protein2e-0653.1
NC_019673:7797666:780941578094157810386972Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0652.4
NC_014976:170683:170683170683171561879Bacillus subtilis BSn5 chromosome, complete genomecysteine and O-acetyl serine efflux permease5e-0652
NC_017195:2027430:203142320314232032301879Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYoaV6e-0652
NC_015379:4249238:425521242552124256129918Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-0652