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Query: NC_015761:1017301:1036394 Salmonella bongori NCTC 12419, complete genome

Start: 1036394, End: 1036723, Length: 330

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:5384015:539883853988385399170333Enterobacter aerogenes EA1509E, complete genomeInner membrane protein1e-39161
NC_003134:64672:706907069071016327Yersinia pestis CO92 plasmid pMT1, complete sequencehypothetical protein7e-38155
NC_005815:61148:954159541595741327Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completehypothetical protein7e-38155
NC_010158:92819:102775102775103101327Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceplasmid stabilization system protein, RelE/ParE family7e-38155
NC_004838:51013:609816098161307327Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein7e-38155
NC_013282:3216226:322300832230083223340333Cronobacter turicensis, complete genomehypothetical protein4e-37152
NC_010067:1829041:184894218489421849148207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-27121
NC_009708:2537557:254639725463972546750354Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRelE/ParE family plasmid stabilization system protein2e-26117
NC_006905:2630000:263885026388502639113264Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein YPMT1696e-1269.3
NC_013959:1195249:120665412066541206986333Sideroxydans lithotrophicus ES-1 chromosome, complete genomeplasmid stabilization system1e-0755.1