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Query: NC_015761:1017301:1026641 Salmonella bongori NCTC 12419, complete genome

Start: 1026641, End: 1027171, Length: 531

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021066:2197490:221820522182052218735531Raoultella ornithinolytica B6, complete genomeKilA, N-terminal/APSES-type HTH DNA-binding domain-containing protein1e-81301
NC_013850:1887556:192385919238591924389531Klebsiella variicola At-22 chromosome, complete genomeKilA, N-terminal/APSES-type HTH DNA-binding domain protein2e-78290
NC_012779:2184927:219289221928922193452561Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-58223
NC_007712:1219957:121995712199571220757801Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-26118
NC_008563:5011997:501540750154075015895489Escherichia coli APEC O1, complete genomehypothetical protein1e-1272.4
NC_010658:1933605:195934419593441960153810Shigella boydii CDC 3083-94, complete genomeKilA-N domain family2e-1272.4
NC_011740:4520373:452288545228854523682798Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin2e-1272
NC_011742:4962008:496541849654184966215798Escherichia coli S88 chromosome, complete genomehypothetical protein2e-1272
NC_004431:3040953:305504030550403055837798Escherichia coli CFT073, complete genomehypothetical protein2e-1272
NC_011750:5045927:506570550657055066514810Escherichia coli IAI39 chromosome, complete genomeputative KilA protein; KilA-N domain4e-1167.4
NC_020418:2910593:291160929116092912400792Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-1167
NC_010501:3987615:399498839949883995743756Pseudomonas putida W619, complete genomephage antirepressor protein1e-0962.4
NC_011094:593100:619506619506620003498Salmonella enterica subsp. enterica serovar Schwarzengrund strKilA-N domain family protein6e-0960.1
NC_009654:615504:627619627619628347729Marinomonas sp. MWYL1, complete genomeKilA domain-containing protein8e-0960.1
NC_012731:2083650:210549521054952106424930Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-0858.9
NC_009255:1369200:138016213801621380944783Burkholderia vietnamiensis G4 chromosome 2, complete sequenceKilA domain-containing protein6e-0753.5
NC_004129:4333302:434784043478404348646807Pseudomonas fluorescens Pf-5, complete genomeSb463e-0651.2