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Query: NC_015761:1017301:1023585 Salmonella bongori NCTC 12419, complete genome

Start: 1023585, End: 1024331, Length: 747

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:2304313:231606023160602316791732Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-72273
NC_011094:1282385:129237812923781293106729Salmonella enterica subsp. enterica serovar Schwarzengrund strpertussis toxin subunit 1 subfamily protein7e-68257
NC_011147:1650142:166535316653531666081729Salmonella enterica subsp. enterica serovar Paratyphi A strpertussis-like toxin subunit1e-67256
NC_006511:1654959:167017016701701670898729Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pertussis-like toxin subunit1e-67256
NC_003198:1771432:178752917875291788257729Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pertussis-like toxin subunit2e-67255
NC_004631:1182883:119287511928751193603729Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pertussis-like toxin subunit2e-67255
NC_016832:1182496:119172111917211192575855Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Pertussis toxin, subunit 1 subfamily3e-67254
NC_015761:1181186:119241311924131193144732Salmonella bongori NCTC 12419, complete genomepertussis-like toxin subunit3e-66251