Pre_GI: BLASTP Hits

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Query: NC_015761:1017301:1020797 Salmonella bongori NCTC 12419, complete genome

Start: 1020797, End: 1021369, Length: 573

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2756000:275913127591312759694564Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein5e-58223
NC_016856:2812905:281360028136002814163564Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Santirepressor-like protein5e-58223
NC_011080:2761403:276209827620982762661564Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-58223
NC_016822:3065426:306682230668223067385564Shigella sonnei 53G, complete genomebacteriophage protein1e-46185
NC_007384:2933625:293551829355182936279762Shigella sonnei Ss046, complete genomeputative bacteriophage protein4e-46184
NC_003198:1908238:191455719145571915114558Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage protein6e-45179
NC_009801:2193000:221002722100272210821795Escherichia coli E24377A, complete genomehypothetical protein2e-44178
NC_011415:2277559:229645222964522297246795Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-44178
NC_013361:1558423:157622315762231576957735Escherichia coli O26:H11 str. 11368 chromosome, complete genomeantirepressor protein1e-37155
NC_007712:3067000:309322930932293094017789Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-34144
NC_007712:4023516:405624040562404057010771Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-29128
NC_008526:506263:507157507157507915759Lactobacillus casei ATCC 334, complete genomePhage anti-repressor protein2e-28125
NC_010999:561914:565165565165565905741Lactobacillus casei, complete genomeAnti-repressor2e-28125
NC_011094:638552:655772655772656566795Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-27121
NC_011837:3226500:325910932591093259915807Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-26118
NC_009706:3291330:332760733276073328413807Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-26118
NC_009089:1093832:109454810945481095342795Clostridium difficile 630, complete genomephage protein7e-23106
NC_012984:1027898:102877910287791029513735Lactobacillus plantarum JDM1, complete genomePhage anti-repressor protein1e-21103
NC_008497:1111891:113078911307891131571783Lactobacillus brevis ATCC 367, complete genomePhage anti-repressor protein2e-21102
NC_009699:2552195:256798325679832568834852Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein4e-21101
NC_017297:2531750:256812225681222568973852Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein4e-21101
NC_015425:1295261:129889312988931299675783Clostridium botulinum BKT015925 chromosome, complete genomephage protein3e-1995.1
NC_009436:1141376:115310011531001153813714Enterobacter sp. 638, complete genomehypothetical protein6e-1994
NC_010516:2676746:270857727085772709377801Clostridium botulinum B1 str. Okra, complete genomephage protein2e-1892
NC_013315:1679000:168033416803341681137804Clostridium difficile CD196 chromosome, complete genomephage anti-repressor3e-1891.3
NC_008527:1036757:104033510403351041057723Lactococcus lactis subsp. cremoris SK11, complete genomePhage anti-repressor protein1e-1169.7
NC_007712:2806500:281664828166482816857210Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-0859.7