Pre_GI: BLASTP Hits

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Query: NC_015761:1017301:1018233 Salmonella bongori NCTC 12419, complete genome

Start: 1018233, End: 1018466, Length: 234

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2756000:276260027626002762833234Salmonella enterica subsp. enterica serovar Typhimurium str. 798damage-inducible protein7e-39158
NC_016856:2812905:281706928170692817302234Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein7e-39158
NC_011080:2761403:276556727655672765800234Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein7e-39158
NC_016612:3314846:333081733308173331050234Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein6e-27119
NC_009792:1770106:177874917787491778994246Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-25114
NC_020181:2097066:210660421066042106837234Enterobacter aerogenes EA1509E, complete genomeDNA-damage-inducible protein I1e-25114
NC_011283:3379181:341354834135483413781234Klebsiella pneumoniae 342 chromosome, complete genomeDinI family protein4e-25113
NC_016612:3803130:382038438203843820617234Klebsiella oxytoca KCTC 1686 chromosome, complete genomeDinI family protein1e-23108
NC_012912:1788308:183736018373601837602243Dickeya zeae Ech1591, complete genomeDinI family protein7e-1682.4
NC_020211:2012480:204033420403342040573240Serratia marcescens WW4, complete genomeDNA damage-inducible protein I7e-1579.3
NC_005810:2508671:251447525144752514720246Yersinia pestis biovar Microtus str. 91001, complete genomeDNA damage-inducible protein I2e-1374.7
NC_008150:2173708:217506721750672175312246Yersinia pestis Antiqua, complete genomeDNA-damage-inducible protein I2e-1374.7
NC_010159:409500:415927415927416172246Yersinia pestis Angola, complete genomeDNA-damage-inducible protein I2e-1374.7
NC_011750:919953:935908935908936156249Escherichia coli IAI39 chromosome, complete genomeputative damage-inducible protein dinI-like5e-1373.2
NC_004088:1909880:192842819284281928673246Yersinia pestis KIM, complete genomedamage-inducible protein I5e-1372.8
NC_013364:3312379:331681133168113317059249Escherichia coli O111:H- str. 11128, complete genomeputative DNA damage-inducible protein8e-1372.4
NC_013008:2889743:289194328919432892191249Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1271.6
NC_002695:2893951:289615128961512896399249Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1271.6
NC_002655:3538656:354608235460823546330249Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1270.9
NC_002695:3468873:347623334762333476481249Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA damage-inducible protein2e-1270.9
NC_011353:3573641:358034135803413580589249Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-1270.9
NC_013008:3525428:353521835352183535466249Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1270.9
NC_013364:4990365:499995749999575000205249Escherichia coli O111:H- str. 11128, complete genomeputative DNA damage-inducible protein2e-1270.9
NC_002655:1909139:192990319299031930250348Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-1270.1
NC_002695:2158314:215831421583142158556243Escherichia coli O157:H7 str. Sakai, complete genomeputative damage-inducible protein7e-1269.3
NC_016845:2306744:232514323251432325391249Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DinI family protein1e-1168.6
NC_013361:2169948:217042521704252170631207Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA damage-inducible protein1e-1168.2
NC_013353:2134556:214094321409432141191249Escherichia coli O103:H2 str. 12009, complete genomeDNA damage-inducible protein1e-1168.2
AP010958:2134556:214094321409432141191249Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative DNA damage-inducible protein1e-1168.2
NC_004431:3012668:301996330199633020169207Escherichia coli CFT073, complete genomeDNA-damage-inducible protein I2e-1064.7
NC_011283:2836000:289120828912082891414207Klebsiella pneumoniae 342 chromosome, complete genomeDinI family protein6e-1062.8
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-0959.7
NC_008800:2695977:272778127277812727957177Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative DNA-damage-inducible protein3e-0857
NC_011147:2676972:268299426829942683227234Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-0857
NC_006511:2677964:268745826874582687691234Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-0857
NC_015224:2017781:202536420253642025540177Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-damage-inducible protein7e-0856.2
NC_020260:312805:326018326018326251234Cronobacter sakazakii Sp291, complete genomedinI-like protein in retron EC671e-0755.5
NC_016810:2871689:288064028806402880873234Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage sos operon Tum protein1e-0755.1
NC_016857:2871689:288064028806402880873234Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Prophage protein1e-0755.1
NC_017046:2869873:287938228793822879615234Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage sos operon Tum protein1e-0755.1
NC_011149:2802199:281269128126912812924234Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-0753.1
NC_007613:761234:769189769189769494306Shigella boydii Sb227, complete genomeputative damage-inducible protein1e-0652
NC_011742:2823000:282326328232632823568306Escherichia coli S88 chromosome, complete genomeDinI-like damage-inducible protein1e-0652
NC_011601:846358:862220862220862453234Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-damage-inducible protein1e-0652
NC_012947:2898179:290549729054972905730234Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeDinI family protein1e-0652
NC_016845:1773416:178164517816451781878234Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative DinI-like damage-inducible protein1e-0652
NC_009800:2788164:279759427975942797788195Escherichia coli HS, complete genomeDinI family protein1e-0652
NC_006856:95830:100618100618100866249Salmonella enterica subsp. enterica serovar Choleraesuis strImpC3e-0650.8
NC_007941:11319:562635626356511249Escherichia coli UTI89 plasmid pUTI89, complete sequenceUV protection and mutation protein3e-0650.4