Pre_GI: BLASTP Hits

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Query: NC_015761:1017301:1017301 Salmonella bongori NCTC 12419, complete genome

Start: 1017301, End: 1018047, Length: 747

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011748:2655989:267148226714822672261780Escherichia coli 55989, complete genomehypothetical protein from phage1e-101369
CU928145:2655989:267148226714822672261780Escherichia coli 55989 chromosome, complete genomehypothetical protein from phage1e-101369
NC_007712:2897000:289757528975752898336762Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-79293
NC_013353:2911741:291876929187692919512744Escherichia coli O103:H2 str. 12009, complete genomeantirepressor protein2e-66252
AP010958:2911741:291876929187692919512744Escherichia coli O103:H2 str. 12009 DNA, complete genomeantirepressor protein2e-66252
NC_009800:320115:327868327868328461594Escherichia coli HS, complete genomehypothetical protein2e-60232
NC_011094:638552:655441655441655761321Salmonella enterica subsp. enterica serovar Schwarzengrund strAnt23e-24112
NC_017167:1648913:168576016857601686524765Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor1e-1480.1
NC_014624:2878457:289492028949202895681762Eubacterium limosum KIST612 chromosome, complete genomephage antirepressor protein7e-1374.3
NC_015437:1494777:150309515030951503838744Selenomonas sputigena ATCC 35185 chromosome, complete genomeprophage antirepressor4e-1272
NC_008570:2216736:222494522249452225355411Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein9e-1167.4