Pre_GI: BLASTP Hits

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Query: NC_015733:1976752:1998011 Pseudomonas putida S16 chromosome, complete genome

Start: 1998011, End: 1998688, Length: 678

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014910:1050706:105552010555201056194675Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase1e-68259
NC_015137:2616222:262897226289722629649678Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDimethylmenaquinone methyltransferase2e-67254
NC_015186:2165628:218785521878552188535681Acidiphilium multivorum AIU301, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase2e-66251
NC_015873:790961:800227800227800916690Megasphaera elsdenii DSM 20460, complete genomedimethylmenaquinone methyltransferase2e-47189
NC_010511:3947948:395954139595413960167627Methylobacterium sp. 4-46 chromosome, complete genomedimethylmenaquinone methyltransferase4e-41167
NC_016048:3899878:391144839114483912131684Oscillibacter valericigenes Sjm18-20, complete genomealdolase4e-41167
NC_015389:616430:635976635976636683708Coriobacterium glomerans PW2 chromosome, complete genomeDimethylmenaquinone methyltransferase4e-39161
NC_011894:957897:967729967729968400672Methylobacterium nodulans ORS 2060, complete genomeDimethylmenaquinone methyltransferase3e-37155
NC_012792:1091669:110844111084411109112672Variovorax paradoxus S110 chromosome 2, complete genomeDimethylmenaquinone methyltransferase2e-37155
NC_011892:352652:361972361972362682711Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeDimethylmenaquinone methyltransferase2e-37155
NC_015458:1692401:170369917036991704172474Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein7e-37154
NC_012660:4734363:473569747356974736362666Pseudomonas fluorescens SBW25 chromosome, complete genomeputative aldolase6e-36150
NC_010505:3690000:371358537135853714232648Methylobacterium radiotolerans JCM 2831, complete genomeDimethylmenaquinone methyltransferase4e-34144
NC_010086:1816378:182093918209391821637699Burkholderia multivorans ATCC 17616 chromosome 2, completeDimethylmenaquinone methyltransferase2e-32139
NC_015727:1076927:108099210809921081660669Cupriavidus necator N-1 plasmid BB1p, complete sequencedimethylmenaquinone methyltransferase MenG9e-30130
NC_014258:127500:140638140638141330693Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative demethylmenaquinone methyltransferase1e-28126
NC_015634:652000:652074652074652694621Bacillus coagulans 2-6 chromosome, complete genomeDimethylmenaquinone methyltransferase3e-25115
NC_016023:579000:602240602240602860621Bacillus coagulans 36D1 chromosome, complete genomeDimethylmenaquinone methyltransferase3e-25115
NC_013093:4890557:490029249002924900882591Actinosynnema mirum DSM 43827, complete genomeDimethylmenaquinone methyltransferase3e-24112
NC_009512:1518113:153624715362471536885639Pseudomonas putida F1, complete genomeDimethylmenaquinone methyltransferase5e-2097.8
NC_012522:3038890:304859130485913049262672Rhodococcus opacus B4, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase2e-1995.5
NC_014206:2971304:298171029817102982435726Geobacillus sp. C56-T3 chromosome, complete genomedimethylmenaquinone methyltransferase4e-1995.1
NC_007951:2233676:223367622336762234383708Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative dimethylmenaquinone methyltransferase2e-1892.8
NC_015953:2681331:269576726957672696390624Streptomyces sp. SirexAA-E chromosome, complete genomeDimethylmenaquinone methyltransferase3e-1891.7
NC_014910:1765065:179211617921161792748633Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase5e-1891.3
NC_014817:29795:322763227632965690Asticcacaulis excentricus CB 48 chromosome 2, complete sequence4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase4e-1788.2
NC_016582:93754:974799747998117639Streptomyces bingchenggensis BCW-1 chromosome, complete genomedimethylmenaquinone methyltransferase9e-1787
NC_009512:1518113:153004315300431530759717Pseudomonas putida F1, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase1e-1687
NC_013665:849508:8543158543158556011287Methanocella paludicola SANAE, complete genome3-hexulose-6-phosphate synthase1e-1480.1
NC_016604:3137694:314377031437703144462693Mycobacterium rhodesiae NBB3 chromosome, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase1e-1480.1
NC_013716:3327881:332997333299733330686714Citrobacter rodentium ICC168, complete genomeputative methyl transferase1e-1479.7
NC_020911:3046916:306754330675433068232690Octadecabacter antarcticus 307, complete genomehypothetical protein2e-1479.7
NC_019977:253895:2734122734122745631152Methanomethylovorans hollandica DSM 15978, complete genomeDemethylmenaquinone methyltransferase4e-1478.6
NC_013510:1295439:130282713028271303306480Thermomonospora curvata DSM 43183, complete genomeregulator of ribonuclease activity A8e-1477.4
NC_009512:3618055:362013936201393620855717Pseudomonas putida F1, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase4e-1375.1
NC_009712:669647:6707536707536720391287Candidatus Methanoregula boonei 6A8, complete genomebifunctional hexulose-6-phosphate synthase/ribonuclease regulator5e-1374.7
NC_014974:1076565:108607210860721086740669Thermus scotoductus SA-01 chromosome, complete genomedimethylmenaquinone methyltransferase2e-1272.8
NC_003911:2540453:256384325638432564538696Silicibacter pomeroyi DSS-3, complete genomealdolase, putative6e-1270.9
NC_014391:1910273:193815719381571938861705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomedimethylmenaquinone methyltransferase1e-1170.1
NC_009511:2726296:274098727409872741685699Sphingomonas wittichii RW1 chromosome, complete genomedimethylmenaquinone methyltransferase1e-1066.6
NC_018581:759932:779297779297779950654Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase1e-1066.6
NC_009664:4423829:451675045167504517262513Kineococcus radiotolerans SRS30216, complete genomeregulator of ribonuclease activity A2e-1065.9
NC_004578:3597083:359752535975253598238714Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-1065.5
NC_018581:3646489:365002036500203650793774Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase2e-0962.8
NC_008705:2763131:2790870279087027923991530Mycobacterium sp. KMS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase3e-0962
NC_008146:2744612:2772982277298227745111530Mycobacterium sp. MCS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase3e-0962
NC_015065:18189:342723427235108837Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceDimethylmenaquinone methyltransferase5e-0961.6
NC_012560:2315350:232624623262462326734489Azotobacter vinelandii DJ, complete genomeRegulator of ribonuclease activity A, RraA6e-0960.8
NC_021150:2315362:232625823262582326746489Azotobacter vinelandii CA6, complete genomeribonuclease activity regulator protein RraA6e-0960.8
NC_018581:759932:778611778611779300690Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase8e-0960.5
NC_011992:1505106:151202215120221512528507Acidovorax ebreus TPSY, complete genomeregulator of ribonuclease activity A1e-0860.1
NC_006526:1976779:200622020062202006927708Zymomonas mobilis subsp. mobilis ZM4, complete genomedemethylmenaquinone methyltransferase4e-0858.2
NC_007494:739403:766355766355767011657Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative 4-hydroxy-4-methyl-2-oxoglutarate aldolase4e-0858.2
NC_009050:427000:449720449720450376657Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDimethylmenaquinone methyltransferase4e-0858.2
NC_015976:814922:820533820533821201669Sphingobium sp. SYK-6, complete genomeputative aldolase1e-0757
NC_015563:4206112:421030442103044211011708Delftia sp. Cs1-4 chromosome, complete genomeDimethylmenaquinone methyltransferase1e-0756.6
NC_009511:2726296:274010027401002740816717Sphingomonas wittichii RW1 chromosome, complete genomedimethylmenaquinone methyltransferase5e-0754.7
NC_015976:814922:819862819862820533672Sphingobium sp. SYK-6, complete genomehypothetical protein5e-0651.2
NC_008786:2687688:270369327036932704358666Verminephrobacter eiseniae EF01-2, complete genomeputative methyltransferase1e-0550.4