Pre_GI: BLASTP Hits

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Query: NC_015733:1793399:1793399 Pseudomonas putida S16 chromosome, complete genome

Start: 1793399, End: 1797043, Length: 3645

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4295831:4297092429709243007333642Pseudomonas fluorescens F113 chromosome, complete genomeprotein SbcC01019
NC_013855:558831:5597075597075634683762Azospirillum sp. B510 plasmid pAB510a, complete sequenceexonuclease2e-63245
NC_009615:2039964:2044986204498620479672982Parabacteroides distasonis ATCC 8503 chromosome, complete genomeATP-dependent exonuclease sbcC3e-62241
NC_016776:3485688:3494865349486534978282964Bacteroides fragilis 638R, complete genomeputative exonuclease4e-56221
NC_003228:3455405:3463154346315434661172964Bacteroides fragilis NCTC 9343, complete genomeputative exonuclease4e-56221
NC_016002:1975000:1976360197636019797823423Pseudogulbenkiania sp. NH8B, complete genomenuclease SbcCD subunit C2e-49198
NC_017328:335160:3599823599823631253144Shigella flexneri 2002017 chromosome, complete genomeATP-dependent dsDNA exonuclease1e-46189
NC_016745:123772:1392501392501426603411Oceanimonas sp. GK1 chromosome, complete genomeSMC domain-containing protein5e-45184
NC_014972:3688000:3712226371222637158883663Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSMC domain-containing protein4e-44181
NC_008740:637870:6514396514396547143276Marinobacter aquaeolei VT8, complete genomeSMC domain protein2e-43178
NC_007484:755058:7563267563267596013276Nitrosococcus oceani ATCC 19707, complete genomeATP-dependent dsDNA exonuclease (SbcC)7e-42173
NC_015497:1058980:1066367106636710700533687Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeSMC domain protein6e-41170
NC_015276:2552484:2552484255248425562843801Marinomonas mediterranea MMB-1 chromosome, complete genomeSMC domain protein1e-39166
NC_015510:8069440:8088951808895180925983648Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSMC domain-containing protein8e-37156
NC_020054:2033982:2036050203605020391333084Fibrella aestuarina BUZ 2 drat genomeNuclease sbcCD subunit C3e-29131
NC_004463:2059500:2075389207538920778392451Bradyrhizobium japonicum USDA 110, complete genomeexonuclease subunit SbcC homolog1e-28129
NC_016641:5528826:5535086553508655384843399Paenibacillus terrae HPL-003 chromosome, complete genomeDNA repair ATPase2e-1999.4
NC_009617:1165539:1172409117240911759003492Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeSMC domain-containing protein3e-1895.1
NC_014483:3498395:3502055350205535054503396Paenibacillus polymyxa E681 chromosome, complete genomeATPase involved in DNA repair2e-1792
NC_016630:1610723:1607605160760516107363132Filifactor alocis ATCC 35896 chromosome, complete genomeexonuclease SbcC3e-1792
NC_014622:3819495:3822728382272838261173390Paenibacillus polymyxa SC2 chromosome, complete genomesmc domain protein4e-1791.3
NC_005140:660305:6603056603056633703066Vibrio vulnificus YJ016 chromosome II, complete sequenceputative exonuclease SbcC7e-1790.5
NC_014328:2203437:2207647220764722111413495Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative nuclease sbcCD subunit C1e-1689.7
NC_012658:545840:5635745635745671043531Clostridium botulinum Ba4 str. 657 chromosome, complete genomeexonuclease SbcCD subunit C7e-1687
NC_004460:81687:8168781687847523066Vibrio vulnificus CMCP6 chromosome II, complete sequenceATPase involved in DNA repair2e-1586.3
NC_010516:583870:5876355876355911653531Clostridium botulinum B1 str. Okra, complete genomeexonuclease SbcC2e-1586.3
NC_003366:255480:2835142835142870413528Clostridium perfringens str. 13, complete genomeprobable exonuclease2e-1586.3
NC_009699:564455:5709295709295744593531Clostridium botulinum F str. Langeland chromosome, complete genomeexonuclease SbcC1e-1586.3
NC_008262:227354:2553562553562588743519Clostridium perfringens SM101, complete genomeexonuclease SbcC1e-1586.3
NC_014966:638355:6383556383556414203066Vibrio vulnificus MO6-24/O chromosome II, complete sequenceexonuclease SbcC2e-1585.9
NC_008261:225425:2528992528992564173519Clostridium perfringens ATCC 13124, complete genomeexonuclease SbcC2e-1585.9
NC_017297:564727:5712015712015727811581Clostridium botulinum F str. 230613 chromosome, complete genome2e-1585.5
NC_011772:2166000:2184317218431721874063090Bacillus cereus G9842, complete genomeputative exonuclease4e-1584.7
NC_011773:2239753:2258273225827322613623090Bacillus cereus AH820 chromosome, complete genomeputative exonuclease6e-1584.3
NC_011658:2275864:2293805229380522968943090Bacillus cereus AH187 chromosome, complete genomeputative exonuclease5e-1584.3
NC_014171:2177353:2196894219689421999833090Bacillus thuringiensis BMB171 chromosome, complete genomeexonuclease SbcC5e-1584.3
NC_011725:2206000:2224750222475022278393090Bacillus cereus B4264 chromosome, complete genomeexonuclease5e-1584.3
NC_015425:405058:4139804139804175103531Clostridium botulinum BKT015925 chromosome, complete genomeexonuclease5e-1584.3
NC_013715:767722:7862597862597895523294Rothia mucilaginosa DY-18, complete genomeATPase involved in DNA repair7e-1584
NC_005957:2196000:2213974221397422170633090Bacillus thuringiensis serovar konkukian str. 97-27, completeexonuclease SbcC6e-1584
NC_012472:2240000:2258080225808022611693090Bacillus cereus 03BB102, complete genomeputative exonuclease6e-1584
NC_014335:2151404:2170610217061021736993090Bacillus cereus biovar anthracis str. CI chromosome, completeexonuclease SbcC6e-1584
NC_021171:1661923:1670095167009516732323138Bacillus sp. 1NLA3E, complete genomeSbcC family exonuclease9e-1583.6
NC_003997:2175843:2194319219431921974083090Bacillus anthracis str. Ames, complete genomeexonuclease, putative2e-1482.8
NC_015578:3561838:3580249358024935834313183Treponema primitia ZAS-2 chromosome, complete genomenuclease sbcCD subunit C2e-1482.8
NC_005945:2175871:2194425219442521975143090Bacillus anthracis str. Sterne, complete genomeexonuclease, putative2e-1482.8
NC_007530:2175967:2194443219444321975323090Bacillus anthracis str. 'Ames Ancestor', complete genomeexonuclease, putative2e-1482.8
NC_012659:2175867:2194343219434321974323090Bacillus anthracis str. A0248, complete genomeputative exonuclease2e-1482.8
NC_016111:409852:4307414307414337493009Streptomyces cattleya NRRL 8057, complete genomeATP-dependent dsDNA exonuclease2e-1482.8
NC_013520:1559000:1577803157780315808863084Veillonella parvula DSM 2008, complete genomeATPase involved in DNA repair-like protein5e-1480.9
NC_015930:821342:8269308269308300673138Lactococcus garvieae ATCC 49156, complete genomeexonuclease SbcC2e-1379
NC_014633:339181:3420573420573450743018Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceSMC domain-containing protein2e-1379
NC_015500:2112975:2146324214632421494163093Treponema brennaborense DSM 12168 chromosome, complete genomeexonuclease2e-1379
NC_015172:1255956:1260972126097212641393168Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeSMC domain-containing protein2e-1379
NC_014554:1339566:1347871134787113510563186Lactobacillus plantarum subsp. plantarum ST-III chromosome,exonuclease SbcC5e-1377.8
NC_015975:441580:4427044427044458083105Lactobacillus ruminis ATCC 27782 chromosome, complete genomeExonuclease SbcCD subunit C1e-1276.3
NC_017955:4746441:4746441474644147487652325Modestobacter marinus, complete genomehypothetical protein1e-1276.3
NC_015437:767572:7702657702657733393075Selenomonas sputigena ATCC 35185 chromosome, complete genomeSMC domain protein4e-1274.7
NC_013730:7118798:7136893713689371399823090Spirosoma linguale DSM 74, complete genomeATPase-like protein involved in DNA repair1e-1069.7
NC_019904:2010999:2007979200797920110023024Echinicola vietnamensis DSM 17526 chromosome, complete genomeDNA repair ATPase4e-1067.8
NC_010612:4400260:4417219441721944202273009Mycobacterium marinum M, complete genomechromosome partition ATPase protein6e-1067.4
NC_017955:4746441:4748762474876247501591398Modestobacter marinus, complete genomehypothetical protein7e-1067.4
NC_009523:1101214:1117623111762311206913069Roseiflexus sp. RS-1 chromosome, complete genomeSMC domain-containing protein2e-0862.8
NC_014314:755166:7738247738247764152592Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeSMC domain-containing protein4e-0861.2
NC_007775:723925:7239257239257272153291Synechococcus sp. JA-3-3Ab, complete genomeexonuclease, SbcC family2e-0759.3
NC_009664:4423829:4442745444274544452342490Kineococcus radiotolerans SRS30216, complete genomeSMC domain protein4e-0655.1