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Query: NC_015571:1065775 Porphyromonas gingivalis TDC60, complete genome

Start: 1065775, End: 1086568, Length: 20794

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_019968:12355001235500127809242593Prevotella dentalis DSM 3688 chromosome 2, complete sequence04617BLASTN svgBLASTP svg
NC_015160:1467445*1467445149520027756Odoribacter splanchnicus DSM 20712 chromosome, complete genome01037BLASTN svgBLASTP svg
NC_019968:1084288*1084288113090746620Prevotella dentalis DSM 3688 chromosome 2, complete sequence0650BLASTN svgBLASTP svg
NC_015160:612000*61200063512223123Odoribacter splanchnicus DSM 20712 chromosome, complete genome3e-157563BLASTN svgBLASTP svg
NC_015311:26268502626850267310446255Prevotella denticola F0289 chromosome, complete genome1e-91345BLASTN svgBLASTP svg
NC_019968:1304450*1304450134324538796Prevotella dentalis DSM 3688 chromosome 2, complete sequence6e-84319BLASTN svgBLASTP svg
NC_002950:1511955*1511955156159949645Porphyromonas gingivalis W83, complete genome6e-81309BLASTN svgBLASTP svg
NC_002950:879930*87993091309933170Porphyromonas gingivalis W83, complete genome9e-77295BLASTN svgBLASTP svg
NC_015311:2489176*2489176250998520810Prevotella denticola F0289 chromosome, complete genome6e-44186BLASTN svgBLASTP svg
NC_014371:88904388904391248723445Prevotella melaninogenica ATCC 25845 chromosome chromosome II,6e-44186BLASTN svgBLASTP svg
NC_015311:18270001827000185257925580Prevotella denticola F0289 chromosome, complete genome2e-43184BLASTN svgBLASTP svg
NC_010729:619664*61966465510835445Porphyromonas gingivalis ATCC 33277, complete genome4e-42180BLASTN svgBLASTP svg
NC_014371:10766421076642109772421083Prevotella melaninogenica ATCC 25845 chromosome chromosome II,2e-28135BLASTN svgBLASTP svg
NC_015164:2961906*2961906298630424399Bacteroides salanitronis DSM 18170 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_006347:11250011250013544622947Bacteroides fragilis YCH46, complete genome3e-18101BLASTN svgBLASTP svg
NC_010729:13852171385217140844823232Porphyromonas gingivalis ATCC 33277, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_006347:15851911585191161240227212Bacteroides fragilis YCH46, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_002950:353549*35354937859925051Porphyromonas gingivalis W83, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006347:28614982861498288479523298Bacteroides fragilis YCH46, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003228:2929006*2929006295209023085Bacteroides fragilis NCTC 9343, complete genome6e-0763.9BLASTN svgBLASTP svg