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Query: NC_015571:1030527 Porphyromonas gingivalis TDC60, complete genome

Start: 1030527, End: 1061708, Length: 31182

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015311:18606661860666190474744082Prevotella denticola F0289 chromosome, complete genome6e-150539BLASTN svgBLASTP svg
NC_019968:1084288*1084288113090746620Prevotella dentalis DSM 3688 chromosome 2, complete sequence5e-70274BLASTN svgBLASTP svg
NC_019968:1304450*1304450134324538796Prevotella dentalis DSM 3688 chromosome 2, complete sequence7e-60240BLASTN svgBLASTP svg
NC_015571:20440002044000210147957480Porphyromonas gingivalis TDC60, complete genome1e-42182BLASTN svgBLASTP svg
NC_015164:2961906*2961906298630424399Bacteroides salanitronis DSM 18170 chromosome, complete genome6e-42180BLASTN svgBLASTP svg
NC_006347:15851911585191161240227212Bacteroides fragilis YCH46, complete genome2e-35159BLASTN svgBLASTP svg
NC_002950:1511955*1511955156159949645Porphyromonas gingivalis W83, complete genome3e-34155BLASTN svgBLASTP svg
NC_002950:879930*87993091309933170Porphyromonas gingivalis W83, complete genome8e-32147BLASTN svgBLASTP svg
NC_015311:26268502626850267310446255Prevotella denticola F0289 chromosome, complete genome5e-27131BLASTN svgBLASTP svg
NC_004663:28591582859158290902849871Bacteroides thetaiotaomicron VPI-5482, complete genome5e-27131BLASTN svgBLASTP svg
NC_014371:88904388904391248723445Prevotella melaninogenica ATCC 25845 chromosome chromosome II,3e-25125BLASTN svgBLASTP svg
NC_015311:2489176*2489176250998520810Prevotella denticola F0289 chromosome, complete genome7e-23117BLASTN svgBLASTP svg
NC_003228:20106432010643208001969377Bacteroides fragilis NCTC 9343, complete genome3e-22115BLASTN svgBLASTP svg
NC_015164:12605001260500128339722898Bacteroides salanitronis DSM 18170 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_006347:11250011250013544622947Bacteroides fragilis YCH46, complete genome1e-18103BLASTN svgBLASTP svg
NC_002950:15713831571383161040039018Porphyromonas gingivalis W83, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015311:18270001827000185257925580Prevotella denticola F0289 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015277:43580004358000438079722798Sphingobacterium sp. 21 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014041:37150003715000374879533796Zunongwangia profunda SM-A87 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015177:18598791859879188524325365Pedobacter saltans DSM 12145 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_004663:6223442*6223442626949946058Bacteroides thetaiotaomicron VPI-5482, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015311:25316162531616255564224027Prevotella denticola F0289 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010729:1179008*1179008120985230845Porphyromonas gingivalis ATCC 33277, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014933:220146*22014625816638021Bacteroides helcogenes P 36-108 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015177:18220001822000184495922960Pedobacter saltans DSM 12145 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015164:29353632935363296059925237Bacteroides salanitronis DSM 18170 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006347:14387614387617632132446Bacteroides fragilis YCH46, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014371:84919884919888585036653Prevotella melaninogenica ATCC 25845 chromosome chromosome II,2e-0765.9BLASTN svgBLASTP svg
NC_015501:1941851*1941851198059938749Porphyromonas asaccharolytica DSM 20707 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_015177:1950461*1950461197627225812Pedobacter saltans DSM 12145 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg