Pre_GI: BLASTP Hits

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Query: NC_015554:4002952:4015325 Alteromonas sp. SN2 chromosome, complete genome

Start: 4015325, End: 4016101, Length: 777

Host Lineage: Alteromonas; Alteromonas; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolate was obtained from crude oil contaminated sea site and has a capacity to degrade PAH's compounds present in crude oil. It can be used for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family6e-1891.3
NC_013739:2106662:212626421262642127019756Conexibacter woesei DSM 14684, complete genometranscriptional regulator, GntR family3e-1789
NC_015458:1692401:169240116924011693138738Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator5e-1684.7
NC_008391:1210451:123699212369921237723732Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, GntR family3e-1582.4
NC_010170:1324758:133437413343741335066693Bordetella petrii, complete genomeprobable transcriptional regulator4e-1582
NC_020829:809457:813097813097813771675Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator4e-1581.6
NC_014831:2082304:210025021002502100963714Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, GntR family2e-1479.3
NC_008148:2231045:227183422718342272532699Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family4e-1478.6
NC_009512:1691930:170640617064061707209804Pseudomonas putida F1, complete genometranscriptional regulator, GntR family5e-1478.2
NC_017986:4374979:438945543894554390258804Pseudomonas putida ND6 chromosome, complete genomeGntR family transcriptional regulator5e-1478.2
NC_009664:4423829:451763545176354518357723Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family5e-1478.2
NC_002947:4931476:493700649370064937698693Pseudomonas putida KT2440, complete genometranscriptional regulator, GntR family9e-1477.4
NC_016642:2440070:247139724713972472071675Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator2e-1376.3
NC_010002:3357752:337233533723353373021687Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family2e-1375.9
NC_010501:4080937:408689040868904087633744Pseudomonas putida W619, complete genometranscriptional regulator, GntR family3e-1375.9
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family5e-1374.7
NC_007953:314872:320623320623321315693Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, GntR family5e-1374.7
NC_013526:65495:890168901689705690Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, GntR family7e-1374.3
NC_016906:4123000:412848441284844129173690Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator9e-1373.9
NC_009667:1341000:136099613609961361676681Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceGntR family transcriptional regulator1e-1273.2
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator2e-1272.8
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator1e-1170.1
NC_018691:2810949:281205628120562812796741Alcanivorax dieselolei B5 chromosome, complete genomeGntR family transcriptional regulator1e-1170.1
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator2e-1169.7
NC_015152:2887414:289483728948372895514678Spirochaeta sp. Buddy chromosome, complete genomeGntR family transcriptional regulator3e-1168.9
NC_018515:937994:937994937994938674681Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator3e-1168.9
NC_014841:131308:133188133188133841654Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, GntR family4e-1168.6
NC_002678:5060670:510937251093725110070699Mesorhizobium loti MAFF303099, complete genometranscription regulator9e-1167.4
NC_010175:3712456:372623837262383726933696Chloroflexus aurantiacus J-10-fl, complete genomeGntR domain protein1e-1067.4
NC_015977:2565922:256592225659222566599678Roseburia hominis A2-183 chromosome, complete genomeGntR domain containing protein1e-1067
NC_003047:3360000:337337633733763374068693Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN1e-1067
NC_020272:3396800:342166934216693422334666Bacillus amyloliquefaciens IT-45, complete genomeFatty acid metabolism regulator protein1e-1066.6
NC_013939:1625491:163812216381221638790669Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator2e-1066.6
NC_010676:897801:899693899693900427735Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, GntR family2e-1066.6
NC_015594:410454:433254433254433979726Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeGntR family transcriptional regulator3e-1065.9
NC_014166:1008266:102271110227111023400690Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeGntR family transcriptional regulator3e-1065.9
NC_013947:1696671:171062117106211711286666Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family3e-1065.9
NC_014815:4621552:465611546561154656822708Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family4e-1065.5
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR4e-1065.5
NC_007952:1293024:129591312959131296710798Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, GntR family4e-1065.1
NC_014931:3642779:365811536581153658783669Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, GntR family6e-1064.7
NC_018681:2447871:245134424513442451982639Nocardia brasiliensis ATCC 700358 chromosome, complete genomeGntR family transcriptional regulator7e-1064.3
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator8e-1064.3
NC_020272:20435:418114181142473663Bacillus amyloliquefaciens IT-45, complete genomeputative HTH-type transcriptional regulator YdhC9e-1064.3
NC_006582:883922:909551909551910216666Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family1e-0963.9
NC_020291:4033000:404904640490464049720675Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, GntR family9e-1063.9
NC_010002:3357752:335915233591523359841690Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family1e-0963.5
NC_004557:2607073:262244126224412623106666Clostridium tetani E88, complete genometranscriptional regulator, gntR family2e-0963.2
NC_013446:2655955:266091026609102661545636Comamonas testosteroni CNB-2, complete genometranscriptional regulator, GntR family2e-0963.2
NC_013729:4835452:485750648575064858159654Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family2e-0963.2
NC_013093:2633000:263436726343672635044678Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family2e-0963.2
NC_008543:323773:326602326602327249648Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, GntR family2e-0963.2
NC_006582:4256915:425897342589734259593621Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family2e-0963.2
NC_008148:1859888:190316519031651903911747Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family2e-0962.8
NC_017191:3901914:390191439019143902573660Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator2e-0962.8
CP002185:2919752:294178929417892942451663Escherichia coli W, complete genomeDNA-binding transcriptional dual regulator4e-0962
NC_010473:2839902:288546128854612886123663Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional dual regulator4e-0962
AP010958:3238742:325819932581993258861663Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional dual regulator CsiR4e-0962
NC_010498:2847359:286928928692892869951663Escherichia coli SMS-3-5, complete genomegab operon transcriptional repressor CsiR4e-0962
AC_000091:2747520:279433027943302794992663Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional dual regulator4e-0962
NC_011601:2998326:302153730215373022199663Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator CsiR4e-0962
NC_011750:2928990:296321029632102963872663Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator CsiR4e-0962
NC_000913:2746886:279369627936962794358663Escherichia coli K12, complete genomeDNA-binding transcriptional dual regulator4e-0962
NC_012759:2633949:267950826795082680170663Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional regulator CsiR4e-0962
NC_014639:3584000:359051735905173591182666Bacillus atrophaeus 1942 chromosome, complete genomeGntR family transcriptional regulator3e-0962
CP002207:3584000:359051735905173591182666Bacillus atrophaeus 1942, complete genomeGntR family transcriptional regulator3e-0962
NC_016822:3065426:308750330875033088165663Shigella sonnei 53G, complete genomeDNA-binding transcriptional regulator CsiR4e-0962
NC_013364:3339768:335928833592883359950663Escherichia coli O111:H- str. 11128, complete genomeDNA-binding transcriptional dual regulator CsiR4e-0962
NC_013361:3651150:367411436741143674776663Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator CsiR4e-0962
NC_013353:3238742:325819932581993258861663Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional dual regulator CsiR4e-0962
NC_012967:2669182:269042726904272691089663Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional regulator CsiR4e-0962
NC_007963:2232000:225526422552642255944681Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family5e-0961.6
NC_015724:339500:343813343813344547735Cupriavidus necator N-1 plasmid BB2p, complete sequenceGntR family transcriptional regulator5e-0961.6
NC_014910:3458475:348208934820893482757669Alicycliphilus denitrificans BC chromosome, complete genomegntr domain protein5e-0961.6
NC_007384:2933625:295532129553212956001681Shigella sonnei Ss046, complete genomeputative transcriptional regulator5e-0961.6
UCMB5137:3660165:366330036633003663956657Bacillus atrophaeus UCMB-5137GntR family transcriptional regulator1e-0860.8
NC_007974:785216:801188801188802060873Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family9e-0960.8
NC_016147:1825827:183168018316801832387708Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeGntR family transcriptional regulator1e-0860.5
NC_011004:4183993:422052942205294221239711Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, GntR family1e-0860.5
NC_014011:472650:487302487302487922621Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family1e-0860.5
NC_011830:2177187:220439422043942205059666Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, GntR family1e-0860.5
CU928160:2818750:284058328405832841245663Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional dual regulator1e-0860.5
NC_011741:2818750:284058328405832841245663Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator CsiR1e-0860.5
NC_007434:2449721:247662724766272477433807Burkholderia pseudomallei 1710b chromosome I, complete sequencetranscriptional regulator, gntR family1e-0860.5
NC_014098:1258559:126150612615061262153648Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family1e-0860.5
NC_008596:4104476:412930241293024129928627Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein1e-0860.5
NC_017275:927814:944351944351944989639Sulfolobus islandicus HVE10/4 chromosome, complete genomeGntR family transcriptional regulator2e-0860.1
NC_009440:1045882:105601610560161056675660Metallosphaera sedula DSM 5348 chromosome, complete genomeGntR family transcriptional regulator1e-0860.1
NC_011742:2863316:288287128828712883533663Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional regulator CsiR1e-0860.1
NC_012108:3824977:383239938323993833073675Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (GntR family protein)1e-0860.1
NC_008563:2946391:296554229655422966222681Escherichia coli APEC O1, complete genomeputative transcriptional regulator YgaE2e-0859.7
NC_004463:1369165:139094013909401391659720Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein2e-0859.3
NC_008254:611437:6283116283116295011191Mesorhizobium sp. BNC1, complete genometranscriptional regulator, GntR family2e-0859.3
NC_015957:5082172:509492150949215095619699Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGntR family transcriptional regulator2e-0859.3
NC_010407:3132683:314793331479333148604672Clavibacter michiganensis subsp. sepedonicus chromosome, completeGntR family transcriptional regulator3e-0858.9
NC_020911:3046916:305943830594383060121684Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator5e-0858.5
NC_018691:761560:778164778164778892729Alcanivorax dieselolei B5 chromosome, complete genomeGntR-family transcriptional regulator4e-0858.5
NC_012108:5273289:528731952873195287996678Desulfobacterium autotrophicum HRM2, complete genomeputative transcriptional regulator4e-0858.5
NC_002754:1061851:108024710802471080885639Sulfolobus solfataricus P2, complete genomeTranscriptional regulator4e-0858.5
NC_015976:2064387:208343820834382084115678Sphingobium sp. SYK-6, complete genomeputative GntR family transcriptional regulator6e-0858.2
NC_014217:2987450:300749430074943008177684Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, GntR family6e-0858.2
NC_017328:2785309:280711528071152807777663Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator6e-0858.2
NC_004337:2747917:276823327682332768895663Shigella flexneri 2a str. 301, complete genomeputative transcriptional regulator6e-0858.2
NC_004741:2741971:276286927628692763531663Shigella flexneri 2a str. 2457T, complete genomeputative transcriptional regulator6e-0858.2
NC_011894:6485500:649703764970376497684648Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family1e-0757
NC_003063:2059311:206138320613832062171789Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein1e-0757
NC_008314:1955793:195959419595941960286693Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator1e-0757
NC_010505:3376322:339823433982343399088855Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, GntR family2e-0756.6
NC_016147:2964178:297771029777102978438729Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeGntR family transcriptional regulator2e-0756.6
NC_009937:412302:415716415716416384669Azorhizobium caulinodans ORS 571, complete genomeGntR family transcriptional regulator2e-0756.6
NC_009142:5647737:565529756552975655986690Saccharopolyspora erythraea NRRL 2338, complete genomepossible transcriptional regulator, GntR family2e-0756.2
NC_004578:6089958:610844861084486109113666Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, GntR family3e-0755.8
NC_003305:1:126631266313373711Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family4e-0755.5
NC_017271:4193000:422159942215994222318720Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator MdcY family5e-0755.1
NC_020453:1025891:103670110367011037402702Agromonas oligotrophica S58 DNA, complete genomeAtrA transcriptional regulator5e-0755.1
NC_013947:5546315:554851655485165549172657Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family5e-0755.1
NC_015856:268034:267125267125268093969Collimonas fungivorans Ter331 chromosome, complete genomeGntR family transcriptional regulator5e-0755.1
NC_012560:2315350:231535023153502316072723Azotobacter vinelandii DJ, complete genometranscriptional regulator, GntR4e-0755.1
NC_021150:2315362:231536223153622316084723Azotobacter vinelandii CA6, complete genometranscriptional regulator, GntR4e-0755.1
NC_008392:666000:681288681288681968681Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, GntR family7e-0754.7
NC_013173:2261396:227212122721212272783663Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, GntR family8e-0754.3
NC_014206:2971304:298470229847022985352651Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator8e-0754.3
NC_006361:5546232:555993755599375560635699Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator1e-0653.9
NC_011961:891815:896992896992897783792Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencetranscriptional regulater GntR family protein1e-0653.9
NC_010511:7553703:755681175568117557539729Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator2e-0653.5
NC_009654:4624459:462698046269804627651672Marinomonas sp. MWYL1, complete genomeGntR family transcriptional regulator1e-0653.5
NC_016825:158626:167712167712168413702Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12GntR family transcriptional regulator1e-0653.5
NC_014840:205723:261196261196261846651Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family1e-0653.5
NC_015563:2702787:271975127197512720407657Delftia sp. Cs1-4 chromosome, complete genomeGntR family transcriptional regulator2e-0653.1
NC_011892:352652:367122367122367793672Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completetranscriptional regulator, GntR family2e-0653.1
NC_004193:2921103:293098429309842931643660Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator3e-0652.8
NC_013520:1905554:191069019106901911397708Veillonella parvula DSM 2008, complete genometranscriptional regulator, GntR family3e-0652.8
NC_014364:815346:829594829594830268675Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, GntR family3e-0652.8
NC_006350:1909639:191544419154441916208765Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative GntR-family regulatory protein2e-0652.8
NC_016048:3667890:367938436793843680112729Oscillibacter valericigenes Sjm18-20, complete genomeputative GntR family transcriptional regulator3e-0652.4
NC_015389:616430:654375654375655133759Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family3e-0652.4
NC_008686:1383891:140152714015271402195669Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, GntR family4e-0652
NC_014632:336000:336166336166336810645Ilyobacter polytropus DSM 2926 chromosome, complete genomeGntR family transcriptional regulator4e-0652
NC_014394:93344:110272110272110943672Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, GntR family4e-0652
NC_020911:3076791:308053030805303081186657Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator4e-0652
NC_015379:4426827:443682144368214437543723Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, GntR family6e-0651.6
NC_016642:1913432:193922219392221939881660Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator5e-0651.6
NC_012587:3177583:317681031768103177586777Rhizobium sp. NGR234, complete genomeputative transcriptional regulator, GntR family5e-0651.6
NC_013850:3340882:335431333543133354966654Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, GntR family5e-0651.6
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH5e-0651.6
NC_008209:1385094:140394714039471404594648Roseobacter denitrificans OCh 114, complete genomeGntR-family transcription regulator, putative6e-0651.2
NC_015145:3657103:367579336757933676560768Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator7e-0651.2
NC_006350:1938631:197258619725861973254669Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative GntR-family transcriptional regulator8e-0651.2
NC_014334:37040:521305213052822693Lactobacillus casei str. Zhang chromosome, complete genometranscriptional regulator8e-0650.8
NC_015458:3390674:340150434015043402238735Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator9e-0650.8
NC_014974:1076565:108378810837881084447660Thermus scotoductus SA-01 chromosome, complete genomeGntR family transcriptional regulator1e-0550.8