Pre_GI: BLASTN Hits

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Query: NC_015410:709947 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 709947, End: 732081, Length: 22135

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:63719363719366076223570Pseudomonas mendocina ymp, complete genome04423BLASTN svgBLASTP svg
NC_015740:40724154072415409719824784Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete01750BLASTN svgBLASTP svg
NC_015556:45433804543380456955726178Pseudomonas fulva 12-X chromosome, complete genome01742BLASTN svgBLASTP svg
NC_009434:41403624140362416039720036Pseudomonas stutzeri A1501, complete genome01542BLASTN svgBLASTP svg
NC_004578:56237835623783565173727955Pseudomonas syringae pv. tomato str. DC3000, complete genome0759BLASTN svgBLASTP svg
NC_007947:79745679745682317625721Methylobacillus flagellatus KT, complete genome4e-79303BLASTN svgBLASTP svg
NC_013416:15269201526920154563618717Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-22115BLASTN svgBLASTP svg
NC_013889:32511832511834919724080Thioalkalivibrio sp. K90mix chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015138:2025000*2025000204785422855Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_014550:7560*75603657129012Arthrobacter arilaitensis Re117, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014550:3839389*3839389387099931611Arthrobacter arilaitensis Re117, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014168:1724993*1724993175913834146Segniliparus rotundus DSM 44985 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002927:37168943716894377039253499Bordetella bronchiseptica RB50, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-1179.8BLASTN svgBLASTP svg
NC_008463:1912348*1912348195418241835Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014830:13179*131794609932921Intrasporangium calvum DSM 43043 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013510:1*11865618656Thermomonospora curvata DSM 43183, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013204:3613824*3613824364749933676Eggerthella lenta DSM 2243, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010524:1005355*1005355103237727023Leptothrix cholodnii SP-6, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015067:2371428*2371428239399922572Bifidobacterium longum subsp. longum JCM 1217, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014318:86874488687448870659919152Amycolatopsis mediterranei U32 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008390:987052987052101116924118Burkholderia cepacia AMMD chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_014844:35826773582677360568023004Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014366:1814000*1814000183684822849Gamma proteobacterium HdN1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,7e-0763.9BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013946:415028*41502844572730700Meiothermus ruber DSM 1279 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003919:2435058*2435058245860723550Xanthomonas axonopodis pv. citri str. 306, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008541:4679022*4679022470999930978Arthrobacter sp. FB24 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_007298:13348761334876136112026245Dechloromonas aromatica RCB, complete genome3e-0661.9BLASTN svgBLASTP svg