Pre_GI: BLASTN Hits

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Query: NC_015410:3791500 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3791500, End: 3812925, Length: 21426

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:34850003485000350721722218Pseudomonas mendocina ymp, complete genome05107BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome03695BLASTN svgBLASTP svg
NC_008463:4389721*4389721441663526915Pseudomonas aeruginosa UCBPP-PA14, complete genome03293BLASTN svgBLASTP svg
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome03293BLASTN svgBLASTP svg
NC_011770:45915004591500460979518296Pseudomonas aeruginosa LESB58, complete genome03287BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome03265BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete03225BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome02194BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome01009BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete0672BLASTN svgBLASTP svg
NC_005085:24572952457295248428326989Chromobacterium violaceum ATCC 12472, complete genome0670BLASTN svgBLASTP svg
NC_013889:1514799*1514799153542720629Thioalkalivibrio sp. K90mix chromosome, complete genome0666BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome4e-162579BLASTN svgBLASTP svg
NC_007347:32046373204637323548530849Ralstonia eutropha JMP134 chromosome 1, complete sequence3e-138500BLASTN svgBLASTP svg
NC_019902:23720972372097239285820762Thioalkalivibrio nitratireducens DSM 14787, complete genome7e-127462BLASTN svgBLASTP svg
NC_011206:22391092239109225942920321Acidithiobacillus ferrooxidans ATCC 53993, complete genome9e-105389BLASTN svgBLASTP svg
NC_010645:3239420*3239420326166922250Bordetella avium 197N, complete genome8e-102379BLASTN svgBLASTP svg
NC_007404:20480002048000206896120962Thiobacillus denitrificans ATCC 25259, complete genome3e-95357BLASTN svgBLASTP svg
NC_019940:13093591309359133197622618Thioflavicoccus mobilis 8321 chromosome, complete genome7e-87329BLASTN svgBLASTP svg
NC_015942:25444072544407256835223946Acidithiobacillus ferrivorans SS3 chromosome, complete genome6e-78299BLASTN svgBLASTP svg
NC_013959:26663212666321269260826288Sideroxydans lithotrophicus ES-1 chromosome, complete genome5e-57230BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome1e-48202BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome1e-42182BLASTN svgBLASTP svg
NC_015947:22318422318424748524302Burkholderia sp. JV3 chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_008095:63234566323456634843724982Myxococcus xanthus DK 1622, complete genome8e-28133BLASTN svgBLASTP svg
NC_015711:81697528169752821033740586Myxococcus fulvus HW-1 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_015850:21476822147682217960631925Acidithiobacillus caldus SM-1 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012560:34164513416451343409917649Azotobacter vinelandii DJ, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021150:34164503416450343409917650Azotobacter vinelandii CA6, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013739:717352*71735274820730856Conexibacter woesei DSM 14684, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009439:37702823770282380177231491Pseudomonas mendocina ymp, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008712:21549921549924259227094Arthrobacter aurescens TC1 plasmid TC1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_015410:37010003701000372390022901Pseudomonas mendocina NK-01 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015410:30034173003417302693723521Pseudomonas mendocina NK-01 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008027:2621443*2621443264643624994Pseudomonas entomophila L48, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome1e-0560BLASTN svgBLASTP svg