Pre_GI: BLASTN Hits

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Query: NC_015410:3093465 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3093465, End: 3157026, Length: 63562

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome5e-164587BLASTN svgBLASTP svg
NC_009439:37702823770282380177231491Pseudomonas mendocina ymp, complete genome6e-133484BLASTN svgBLASTP svg
NC_015556:11885001188500122602637527Pseudomonas fulva 12-X chromosome, complete genome6e-99371BLASTN svgBLASTP svg
NC_003295:27873712787371282580238432Ralstonia solanacearum GMI1000, complete genome1e-78303BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome7e-74287BLASTN svgBLASTP svg
NC_011992:1318691*1318691134516726477Acidovorax ebreus TPSY, complete genome9e-61244BLASTN svgBLASTP svg
NC_011662:10179331017933104515827226Thauera sp. MZ1T, complete genome2e-52216BLASTN svgBLASTP svg
NC_018691:30418513041851306454422694Alcanivorax dieselolei B5 chromosome, complete genome1e-47200BLASTN svgBLASTP svg
NC_008577:14550001455000148935334354Shewanella sp. ANA-3 chromosome 1, complete sequence2e-46196BLASTN svgBLASTP svg
NC_015422:16943631694363172115326791Alicycliphilus denitrificans K601 chromosome, complete genome5e-41178BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome2e-40176BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome1e-38170BLASTN svgBLASTP svg
NC_004578:1719849*1719849174221722369Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-38170BLASTN svgBLASTP svg
NC_010170:22469932246993226783320841Bordetella petrii, complete genome4e-38168BLASTN svgBLASTP svg
NC_012792:70786470786472612718264Variovorax paradoxus S110 chromosome 2, complete genome4e-38168BLASTN svgBLASTP svg
NC_008786:41026064102606412154718942Verminephrobacter eiseniae EF01-2, complete genome7e-34155BLASTN svgBLASTP svg
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome6e-31145BLASTN svgBLASTP svg
NC_011894:31612893161289320428142993Methylobacterium nodulans ORS 2060, complete genome3e-30143BLASTN svgBLASTP svg
NC_006526:19767791976779202212445346Zymomonas mobilis subsp. mobilis ZM4, complete genome3e-30143BLASTN svgBLASTP svg
NC_010508:18656021865602188921923618Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence1e-26131BLASTN svgBLASTP svg
NC_008061:25820002582000260842826429Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence4e-26129BLASTN svgBLASTP svg
NC_008543:26668462666846268814221297Burkholderia cenocepacia HI2424 chromosome 2, complete sequence4e-26129BLASTN svgBLASTP svg
NC_016010:1169850*1169850119450124652Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete9e-21111BLASTN svgBLASTP svg
NC_009348:22475002247500227757630077Aeromonas salmonicida subsp. salmonicida A449, complete genome9e-21111BLASTN svgBLASTP svg
NC_008752:72518972518977609450906Acidovorax avenae subsp. citrulli AAC00-1, complete genome6e-19105BLASTN svgBLASTP svg
NC_010688:30308733030873307137140499Xanthomonas campestris pv. campestris, complete genome2e-18103BLASTN svgBLASTP svg
NC_015458:2338437*2338437237239533959Pusillimonas sp. T7-7 chromosome, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_012560:36671773667177369462427448Azotobacter vinelandii DJ, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_019940:27311052731105276061429510Thioflavicoccus mobilis 8321 chromosome, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_021150:36671763667176369462327448Azotobacter vinelandii CA6, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_015138:20697392069739210074231004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1593.7BLASTN svgBLASTP svg
NC_013194:10401971040197105886218666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete5e-1385.7BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_008319:1306482*1306482136465358172Synechococcus sp. CC9311, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_010681:12164712164714763125985Burkholderia phytofirmans PsJN chromosome 1, complete sequence5e-1075.8BLASTN svgBLASTP svg
NC_007963:81414881414884084326696Chromohalobacter salexigens DSM 3043, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_008340:13036071303607132215618550Alkalilimnicola ehrlichei MLHE-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_008463:41337004133700415823024531Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_003197:17132591713259173659923341Salmonella typhimurium LT2, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_006905:17264161726416175294526530Salmonella enterica subsp. enterica serovar Choleraesuis str1e-0767.9BLASTN svgBLASTP svg
NC_010102:13883441388344141572327380Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-0767.9BLASTN svgBLASTP svg
NC_011080:17096121709612173614226531Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-0767.9BLASTN svgBLASTP svg
NC_011083:17613521761352178789226541Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-0767.9BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0767.9BLASTN svgBLASTP svg
NC_020181:10574761057476107717519700Enterobacter aerogenes EA1509E, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_015663:43471874347187437073923553Enterobacter aerogenes KCTC 2190 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0765.9BLASTN svgBLASTP svg
NC_007348:21151522115152216024045089Ralstonia eutropha JMP134 chromosome 2, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_010067:1300606*1300606132180421199Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-0663.9BLASTN svgBLASTP svg
NC_013440:87175008717500874403126532Haliangium ochraceum DSM 14365, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015588:22813542281354230471323360Isoptericola variabilis 225 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete7e-0661.9BLASTN svgBLASTP svg
NC_014541:3642241*3642241367858636346Ferrimonas balearica DSM 9799 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete7e-0661.9BLASTN svgBLASTP svg
NC_010515:13750911375091141715142061Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence7e-0661.9BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome7e-0661.9BLASTN svgBLASTP svg