Pre_GI: BLASTN Hits

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Query: NC_015410:2698572 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2698572, End: 2744636, Length: 46065

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome013710BLASTN svgBLASTP svg
NC_004129:3965947*3965947398362717681Pseudomonas fluorescens Pf-5, complete genome0916BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome0741BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome5e-176626BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-153551BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome3e-149537BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome2e-144521BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome4e-130474BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome3e-128468BLASTN svgBLASTP svg
NC_014910:2585747*2585747260852622780Alicycliphilus denitrificans BC chromosome, complete genome2e-79305BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome7e-67264BLASTN svgBLASTP svg
NC_009512:27783277836731639534Pseudomonas putida F1, complete genome4e-56228BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome4e-56228BLASTN svgBLASTP svg
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-42182BLASTN svgBLASTP svg
NC_021150:201237*20123722409922863Azotobacter vinelandii CA6, complete genome7e-24121BLASTN svgBLASTP svg
NC_012560:201237*20123722409922863Azotobacter vinelandii DJ, complete genome7e-24121BLASTN svgBLASTP svg
NC_010602:42028442028444011019827Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'3e-20109BLASTN svgBLASTP svg
NC_010842:42585442585444998024127Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome3e-20109BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome3e-20109BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome4e-19105BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome4e-19105BLASTN svgBLASTP svg
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_011748:39585723958572397962121050Escherichia coli 55989, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_018697:1343756*1343756139248048725Cycloclasticus sp. P1 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_015138:3160764*3160764318411723354Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-1075.8BLASTN svgBLASTP svg
NC_014121:50000695000069503057530507Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-0973.8BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome1e-0973.8BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012483:1408500*1408500144907040571Acidobacterium capsulatum ATCC 51196, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_008752:26153602615360264142526066Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_020211:16210001621000164274521746Serratia marcescens WW4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010682:19139411913941193635322413Ralstonia pickettii 12J chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_010552:29370329370332259928897Burkholderia ambifaria MC40-6 chromosome 2, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_010943:929492943752228229Stenotrophomonas maltophilia K279a, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome5e-0661.9BLASTN svgBLASTP svg