Pre_GI: BLASTN Hits

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Query: NC_015410:2505168 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2505168, End: 2534045, Length: 28878

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:42467874246787426900822222Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete6e-1177.8BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-21111BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-20109BLASTN svgBLASTP svg
NC_008570:1094442*1094442111732922888Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_015424:1603000*1603000163382230823Aeromonas veronii B565 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015424:35207833520783357390853126Aeromonas veronii B565 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013851:31669693166969319361626648Allochromatium vinosum DSM 180 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_013851:3142182*3142182316259920418Allochromatium vinosum DSM 180 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009937:5033152*5033152505948226331Azorhizobium caulinodans ORS 571, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_008391:63999663999666160321608Burkholderia cepacia AMMD chromosome 2, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-0765.9BLASTN svgBLASTP svg
NC_012721:10950010950012980920310Burkholderia glumae BGR1 chromosome 2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009078:15785001578500160125422755Burkholderia pseudomallei 1106a chromosome II, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007435:30593730593732993724001Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_006351:16317601631760165459922840Burkholderia pseudomallei K96243 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete4e-1281.8BLASTN svgBLASTP svg
NC_014118:987889987889104450356615Burkholderia sp. CCGE1002 chromosome chromosome 2, complete3e-0661.9BLASTN svgBLASTP svg
NC_010424:69718769718777730380117Candidatus Desulforudis audaxviator MP104C, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007963:27770662777066279798320918Chromohalobacter salexigens DSM 3043, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013446:3147202*3147202318258835387Comamonas testosteroni CNB-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020260:2725201*2725201275882333623Cronobacter sakazakii Sp291, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007298:2689731*2689731272716337433Dechloromonas aromatica RCB, complete genome1e-18103BLASTN svgBLASTP svg
NC_013173:815696*81569684198426289Desulfomicrobium baculatum DSM 4028, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015573:64980064980067054820749Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014844:1634985*1634985166007225088Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014844:51155251155253463823087Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011883:2680380*2680380271559935220Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,9e-0763.9BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011146:896000*89600091840322404Geobacter bemidjiensis Bem, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010814:90319990319992459921401Geobacter lovleyi SZ, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome6e-20107BLASTN svgBLASTP svg
NC_007645:35811143581114360707925966Hahella chejuensis KCTC 2396, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_006396:87845387845391096932517Haloarcula marismortui ATCC 43049 chromosome I, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_013202:59278592789672237445Halomicrobium mukohataei DSM 12286, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015666:2721350*2721350274409922750Halopiger xanaduensis SH-6 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_009664:570768*57076859843127664Kineococcus radiotolerans SRS30216, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012559:13019881301988132559923612Laribacter hongkongensis HLHK9, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008825:27006172700617271935418738Methylibium petroleiphilum PM1, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007644:20998782099878212213022253Moorella thermoacetica ATCC 39073, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014837:3633378*3633378366348330106Pantoea sp. At-9b chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_009454:2663539*2663539269835134813Pelotomaculum thermopropionicum SI, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015379:5002595*5002595502209219498Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome6e-20107BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007492:33840773384077341717433098Pseudomonas fluorescens PfO-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome3e-22115BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome5e-39170BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome1e-85325BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome1e-18103BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002947:2589951*2589951263659946649Pseudomonas putida KT2440, complete genome6e-85323BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007005:31998203199820323980239983Pseudomonas syringae pv. syringae B728a, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004578:39211993921199394421523017Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_008435:39151103915110393809922990Rhodopseudomonas palustris BisA53, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,9e-1073.8BLASTN svgBLASTP svg
NC_006905:17264161726416175294526530Salmonella enterica subsp. enterica serovar Choleraesuis str9e-1073.8BLASTN svgBLASTP svg
NC_011083:17613521761352178789226541Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-1073.8BLASTN svgBLASTP svg
NC_011080:17096121709612173614226531Salmonella enterica subsp. enterica serovar Newport str. SL254,9e-1073.8BLASTN svgBLASTP svg
NC_010102:13883441388344141572327380Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,9e-1073.8BLASTN svgBLASTP svg
NC_003197:17132591713259173659923341Salmonella typhimurium LT2, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome2e-20109BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome7e-26127BLASTN svgBLASTP svg
NC_008577:14896431489643151651426872Shewanella sp. ANA-3 chromosome 1, complete sequence9e-1383.8BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018868:1352000*1352000138222930230Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006177:10604281060428108247522048Symbiobacterium thermophilum IAM 14863, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014220:1269870*1269870128997920110Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014831:22247332224733225059925867Thermaerobacter marianensis DSM 12885 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-1593.7BLASTN svgBLASTP svg
NC_013722:15778181577818160047922662Xanthomonas albilineans, complete genome1e-1179.8BLASTN svgBLASTP svg