Pre_GI: BLASTP Hits

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Query: NC_015410:3093465:3145779 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3145779, End: 3146048, Length: 270

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5846415:5874989587498958777242736Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LuxR family3e-0960.5
NC_015738:629297:636439636439637191753Eggerthella sp. YY7918, complete genomeDNA-binding HTH domain-containing protein3e-0960.5
NC_016887:2269177:229490122949012295518618Nocardia cyriacigeorgica GUH-2, complete genomeresponse regulator, two-component system5e-0959.7
NC_008702:2942246:294529629452962945943648Azoarcus sp. BH72, complete genometwo-component response regulator8e-0959.3
NC_009617:4436837:443916244391624439821660Clostridium beijerinckii NCIMB 8052 chromosome, complete genometwo component LuxR family transcriptional regulator2e-0858.2
NC_013093:2471574:2482116248211624849862871Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, LuxR family2e-0858.2
NC_015275:521436:523652523652524410759Clostridium lentocellum DSM 5427 chromosome, complete genomeATP-dependent transcriptional regulator, MalT-like, LuxR family4e-0857
NC_015683:2469481:247103224710322471670639Corynebacterium ulcerans BR-AD22 chromosome, complete genometwo-component system transcriptional regulator3e-0857
NC_016616:2644883:266033226603322660964633Dechlorosoma suillum PS chromosome, complete genomeresponse regulator1e-0755.5
NC_017353:646195:661369661369662022654Staphylococcus lugdunensis N920143, complete genomeputative response regulator1e-0755.1
NC_007795:2455468:245889824588982459500603Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein2e-0754.7
NC_013450:2463271:246426924642692464871603Staphylococcus aureus subsp. aureus ED98, complete genometranscriptional regulatory protein DegU, putative2e-0754.7
NC_016928:2411486:241248424124842413086603Staphylococcus aureus subsp. aureus M013 chromosome, completetwo-component response regulator2e-0754.7
NC_017337:2478877:248076724807672481369603Staphylococcus aureus subsp. aureus ED133 chromosome, completetwo-component response regulator2e-0754.7
NC_017341:2544327:254532525453252545927603Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,LuxR family two component transcriptional regulator2e-0754.7
NC_017342:857630:875234875234875836603Staphylococcus aureus subsp. aureus TCH60 chromosome, completeLuxR family DNA-binding response regulator2e-0754.7
NC_017343:2367177:237060623706062371208603Staphylococcus aureus subsp. aureus ECT-R 2, complete genometranscriptional regulatory protein degU (Protease production enhancerprotein)2e-0754.7
NC_017347:2511783:251278125127812513383603Staphylococcus aureus subsp. aureus T0131 chromosome, completeOxygen regulatory protein nreC2e-0754.7
NC_017351:2489460:249105724910572491659603Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeoxygen regulatory protein nreC2e-0754.7
NC_015152:2831566:285606528560652857009945Spirochaeta sp. Buddy chromosome, complete genomeLuxR family transcriptional regulator2e-0754.7
NC_002953:2435667:244029424402942440947654Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative response regulator2e-0754.3
NC_002951:2448000:244823224482322448885654Staphylococcus aureus subsp. aureus COL, complete genometranscriptional regulatory protein DegU, putative2e-0754.3
NC_017338:2456000:245638824563882457041654Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeLuxR family two component transcriptional regulator2e-0754.3
NC_007622:2399347:240034424003442400997654Staphylococcus aureus RF122, complete genometwo-component response regulator2e-0754.3
NC_002952:2550500:255266825526682553321654Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative response regulator2e-0754.3
NC_016584:1436710:1444035144403514466622628Desulfosporosinus orientis DSM 765 chromosome, complete genomeATP-dependent transcriptional regulator2e-0754.3
NC_016935:4117485:4196021419602141986182598Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transcriptional regulator3e-0754.3
NC_015690:4361000:4429885442988544324822598Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative transcriptional regulator3e-0754.3
NC_007793:2510801:251179925117992512452654Staphylococcus aureus subsp. aureus USA300, complete genometranscriptional regulator, DegU family2e-0754.3
NC_002758:2515310:251873925187392519392654Staphylococcus aureus subsp. aureus Mu50, complete genomeresponse regulators of two-component regulatory2e-0754.3
NC_016941:2395502:239731123973112397964654Staphylococcus aureus subsp. aureus MSHR1132, complete genomeoxygen regulatory protein NreC2e-0754.3
NC_016912:2329113:233011123301112330764654Staphylococcus aureus subsp. aureus VC40 chromosome, completeDegU family transcriptional regulator2e-0754.3
NC_009641:2513300:251673025167302517383654Staphylococcus aureus subsp. aureus str. Newman chromosome,transcriptional regulator DegU family protein2e-0754.3
NC_009632:2545419:254884825488482549501654Staphylococcus aureus subsp. aureus JH1 chromosome, completeresponse regulator receiver2e-0754.3
NC_010079:2510951:251194925119492512602654Staphylococcus aureus subsp. aureus USA300_TCH1516, completetranscriptional regulator2e-0754.3
NC_002745:2446722:244772024477202448373654Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein2e-0754.3
NC_009782:2519379:252037725203772521030654Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein2e-0754.3
NC_003923:2460130:246112824611282461781654Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-0754.3
NC_011283:4438500:4484630448463044873952766Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AcoK4e-0753.5
NC_007760:3948730:396420739642073964734528Anaeromyxobacter dehalogenans 2CP-C, complete genometranscriptional regulator, LuxR family4e-0753.5
NC_014654:1581689:160007716000771600844768Halanaerobium sp. 'sapolanicus' chromosome, complete genometranscriptional regulator, LuxR family4e-0753.5
NC_014147:765941:769906769906770562657Moraxella catarrhalis RH4 chromosome, complete genometwo-component system nitrate/nitrite response regulator NarL5e-0753.1
NC_002947:4362271:437030543703054371102798Pseudomonas putida KT2440, complete genometranscriptional regulator, LuxR family7e-0752.8
NC_009434:3413461:3415410341541034180282619Pseudomonas stutzeri A1501, complete genometranscriptional regulator6e-0752.8
NC_019757:2243796:224509122450912245771681Cylindrospermum stagnale PCC 7417, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain8e-0752.4
NC_007498:1148249:114972211497221150393672Pelobacter carbinolicus DSM 2380, complete genometwo component signal transduction response regulator1e-0652
NC_009523:585367:6023956023956038101416Roseiflexus sp. RS-1 chromosome, complete genomeresponse regulator receiver protein1e-0652
NC_013061:4988500:500160450016045002362759Pedobacter heparinus DSM 2366, complete genomeregulatory protein LuxR2e-0651.6
NC_007907:4692336:471296347129634713610648Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0651.6
NC_012731:1088321:1093493109349310962582766Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometrans-acting regulatory protein of aco operon2e-0651.2
NC_019771:1356000:136497313649731365605633Anabaena cylindrica PCC 7122, complete genometwo component transcriptional regulator, LuxR family2e-0651.2
NC_004461:2002000:200398020039802004636657Staphylococcus epidermidis ATCC 12228, complete genomeresponse regulators of two-component regulatory3e-0650.8
NC_016114:3275004:328292532829253283557633Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeLuxR family transcriptional regulator3e-0650.8
NC_013216:3473119:347622334762233476894672Desulfotomaculum acetoxidans DSM 771, complete genometwo component transcriptional regulator, LuxR family3e-0650.8
NC_013235:1325975:132926613292661329862597Nakamurella multipartita DSM 44233, complete genometwo component transcriptional regulator, LuxR family2e-0650.8
NC_007168:665284:682342682342682995654Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0650.8
NC_014355:2635500:265823626582362658943708Candidatus Nitrospira defluvii, complete genomeputative LuxR family response regulator3e-0650.4
NC_015656:3200500:322568332256833226333651Frankia symbiont of Datisca glomerata chromosome, complete genometwo component LuxR family transcriptional regulator4e-0650.4
NC_007204:696972:717103717103717762660Psychrobacter arcticus 273-4, complete genomenitrate/nitrite response regulator, possibly NarL5e-0650.1
NC_014314:238043:242796242796243539744Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeLuxR family two component transcriptional regulator5e-0650.1
NC_010571:5127812:5147051514705151481571107Opitutus terrae PB90-1, complete genometranscriptional regulator, LuxR family5e-0650.1
NC_016114:7282882:731159573115957312209615Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeLuxR family transcriptional regulator5e-0650.1
NC_018515:1406816:1406816140681614094732658Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeATP-dependent transcriptional regulator5e-0650.1
NC_016111:134444:1396081396081423852778Streptomyces cattleya NRRL 8057, complete genomeTranscriptional regulator, luxR family4e-0650.1
NC_007335:1474455:148671214867121486987276Prochlorococcus marinus str. NATL2A, complete genomeregulatory protein, LuxR4e-0650.1
NC_007908:4677856:4680475468047546831592685Rhodoferax ferrireducens T118, complete genomeATP-dependent transcriptional regulator, MalT-like, LuxR family5e-0649.7
NC_009328:448224:494722494722495354633Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA-binding response regulator5e-0649.7
NC_008819:199760:212018212018212290273Prochlorococcus marinus str. NATL1A, complete genomeBacterial regulatory protein, LuxR family6e-0649.7
NC_020995:2255521:225627422562742256903630Enterococcus casseliflavus EC20, complete genomeLuxR family DNA-binding response regulator8e-0649.3
NC_014960:1697818:172914817291481729801654Anaerolinea thermophila UNI-1, complete genomeNarL family two-component response regulator8e-0649.3
NC_013501:1140390:115172711517271152362636Rhodothermus marinus DSM 4252, complete genometwo component transcriptional regulator, LuxR family7e-0649.3
NC_015953:6212366:624157962415796242253675Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator7e-0649.3
NC_011080:1470794:147249914724991473137639Salmonella enterica subsp. enterica serovar Newport str. SL254,response regulator1e-0548.9
NC_011083:1476894:147859914785991479237639Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,response regulator1e-0548.9
NC_011274:1763676:179530217953021795940639Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91two-component response regulator1e-0548.9
NC_011294:1723852:175547717554771756115639Salmonella enterica subsp. enterica serovar Enteritidis strtwo-component response regulator1e-0548.9
NC_016810:1428201:142993614299361430574639Salmonella enterica subsp. enterica serovar Typhimurium strputative two-component response regulator1e-0548.9
NC_016831:1236786:123849212384921239130639Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative two-component response regulator1e-0548.9
NC_016856:1481325:148306014830601483698639Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sresponse regulator1e-0548.9
NC_016857:1428201:142993614299361430574639Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74response regulator1e-0548.9
NC_017046:1428272:143000714300071430645639Salmonella enterica subsp. enterica serovar Typhimurium str. 798two-component response regulator1e-0548.9
NC_013093:2633000:266768826676882668353666Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family1e-0548.9
NC_016514:1142607:117256511725651173197633Enterobacter cloacae EcWSU1 chromosome, complete genomenitrate/nitrite response regulator protein-like protein1e-0548.9
NC_011149:3187022:320031032003103201056747Salmonella enterica subsp. enterica serovar Agona str. SL483,LysR-family transcriptional regulator9e-0648.9
NC_015656:132633:1686491686491699141266Frankia symbiont of Datisca glomerata chromosome, complete genomeLuxR family transcriptional regulator9e-0648.9
NC_003197:1471349:147308414730841473722639Salmonella typhimurium LT2, complete genomeresponse regulator1e-0548.9