Pre_GI: BLASTP Hits

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Query: NC_015410:3093465:3106275 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3106275, End: 3107654, Length: 1380

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:5576458:5584103558410355854881386Pseudomonas entomophila L48, complete genometransposase, IS4 family0659
NC_018691:318662:3297063297063311331428Alcanivorax dieselolei B5 chromosome, complete genomePutative transposase, IS4 family9e-151533
NC_015422:4508028:4545748454574845471271380Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS4 family protein4e-129461
NC_007948:1695500:1712930171293017143061377Polaromonas sp. JS666, complete genometransposase, IS46e-128457
NC_015556:130437:146600146600147196597Pseudomonas fulva 12-X chromosome, complete genome1e-69264
NC_007948:517893:519384519384519866483Polaromonas sp. JS666, complete genome6e-41168
NC_007404:2048000:206030620603062061073768Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein1e-31138
NC_013440:3947493:3961875396187539632241350Haliangium ochraceum DSM 14365, complete genometransposase IS4 family protein4e-21103
NC_007613:4119771:4131701413170141330171317Shigella boydii Sb227, complete genomeIS4 ORF2e-20100
NC_017328:3655876:3674947367494736762931347Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF2e-1997.8
NC_004337:3590323:3938517393851739398631347Shigella flexneri 2a str. 301, complete genomeIS4 ORF2e-1997.8
NC_017328:3935185:3943321394332139446491329Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF2e-1997.8
NC_004741:4132056:4132056413205641333841329Shigella flexneri 2a str. 2457T, complete genomeIS4 orf2e-1997.1
NC_007384:4095016:4114725411472541160711347Shigella sonnei Ss046, complete genomeIS4 ORF2e-1997.1
NC_008258:269806:2883692883692897151347Shigella flexneri 5 str. 8401, complete genomeIS4 ORF5e-1996.3
NC_007384:1696831:1711913171191317132591347Shigella sonnei Ss046, complete genomeIS4 ORF4e-1996.3
NC_016822:1781644:1784123178412317854691347Shigella sonnei 53G, complete genomeIS4 orf4e-1996.3
NC_016822:2678691:2678691267869126800371347Shigella sonnei 53G, complete genomeIS4 orf4e-1996.3
NC_004337:3590323:3917660391766039190061347Shigella flexneri 2a str. 301, complete genomeIS4 ORF5e-1995.9
NC_004369:41236:4297842978441921215Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-1895.1
NC_004369:1268956:1282157128215712833711215Corynebacterium efficiens YS-314, complete genomeputative transposase1e-1895.1
NC_007384:2587876:2587876258787625892221347Shigella sonnei Ss046, complete genomeIS4 ORF1e-1894.7
NC_011751:4992500:5010215501021550115611347Escherichia coli UMN026 chromosome, complete genomeputative IS4 transposase; KpLE2 phage-like element2e-1894
NC_000913:4494773:4500126450012645014541329Escherichia coli K12, complete genomeKpLE2 phage-like element; IS4 predicted transposase3e-1893.6
NC_010473:4596500:4601934460193446032621329Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; IS4 predicted transposase3e-1893.6
AC_000091:4501430:4506783450678345081111329Escherichia coli W3110 DNA, complete genomeIS4 predicted transposase3e-1893.6
NC_012759:4433500:4438861443886144401891329Escherichia coli BW2952 chromosome, complete genomeKpLE2 phage-like element; IS4 putative transposase3e-1893.6
NC_012947:3917619:3928785392878539301131329Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS4 family protein3e-1893.6
NC_012967:4473368:4483995448399544853231329Escherichia coli B str. REL606 chromosome, complete genomeIS4 putative transposase3e-1893.6
NC_004431:3513147:3532771353277135341201350Escherichia coli CFT073, complete genomeTransposase insG for insertion sequence element IS43e-1893.2
NC_004369:437594:4467754467754479621188Corynebacterium efficiens YS-314, complete genomehypothetical protein6e-1892.4
NC_009921:4035225:4059514405951440607791266Frankia sp. EAN1pec, complete genometransposase IS4 family protein2e-1790.5
NC_019673:2051363:2104510210451021057841275Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family4e-1789.7
NC_009953:3509229:3529981352998135313361356Salinispora arenicola CNS-205 chromosome, complete genometransposase IS4 family protein5e-1789.4
NC_019673:3253650:3265193326519332664581266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family5e-1789.4
NC_019673:8057941:8062858806285880641231266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family1e-1688.6
NC_019673:1384795:1399984139998414012491266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family1e-1688.6
NC_017047:4379989:4402292440229244036141323Rahnella aquatilis HX2 chromosome, complete genometransposase IS4 family protein3e-1687
NC_015061:3725921:3730563373056337318851323Rahnella sp. Y9602 chromosome, complete genometransposase IS4 family protein2e-1687
NC_017047:3793000:3795224379522437965461323Rahnella aquatilis HX2 chromosome, complete genometransposase IS4 family protein2e-1687
NC_011768:79297:8647786477877451269Desulfatibacillum alkenivorans AK-01, complete genometransposase IS4 family protein8e-1685.5
NC_013093:1909305:1910513191051319117331221Actinosynnema mirum DSM 43827, complete genometransposase IS4 family protein5e-1582.8
NC_012560:3303961:3306480330648033076461167Azotobacter vinelandii DJ, complete genomeTransposase, IS4 protein6e-1582.4
NC_021150:3303959:3306478330647833076441167Azotobacter vinelandii CA6, complete genomeTransposase, IS4 protein6e-1582.4
NC_011312:3060371:3060371306037130616961326Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completetransposase2e-1480.9
NC_013716:4408201:4408201440820144095381338Citrobacter rodentium ICC168, complete genomeISCro3 transposase6e-1375.9
NC_015422:4508028:4509693450969345108981206Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS4 family protein2e-1273.9
NC_005139:2201820:2256801225680122581381338Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative1e-1068.6
NC_010625:229478:2380132380132393411329Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetransposase IS4 family protein2e-1067.4
NC_012912:242709:2468462468462481711326Dickeya zeae Ech1591, complete genometransposase IS4 family protein3e-1067
NC_012912:1788308:1815719181571918170441326Dickeya zeae Ech1591, complete genometransposase IS4 family protein3e-1067
NC_016943:1037000:1049565104956510509021338Blastococcus saxobsidens DD2, complete genometransposase4e-1066.2
NC_013194:1955582:1963647196364719647501104Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein2e-0964.3
NC_013194:102000:1125541125541136571104Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein2e-0964.3
NC_013194:102000:1235481235481246511104Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein2e-0964.3
NC_004459:1679335:168432316843231684952630Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase and inactivated derivatives7e-0962.4
NC_009256:2945059:2946142294614229473501209Burkholderia vietnamiensis G4 chromosome 1, complete sequencetransposase, IS4 family protein1e-0861.2
NC_009255:213245:2203062203062215141209Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase, IS4 family protein1e-0861.2
NC_009254:700891:7008917008917020991209Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase, IS4 family protein1e-0861.2
NC_009656:115390:1249551249551262261272Pseudomonas aeruginosa PA7 chromosome, complete genometransposase DDE domain-containing protein3e-0757
NC_009921:2565640:257536525753652576321957Frankia sp. EAN1pec, complete genomeinsertion element conserved hypothetical protein2e-0654.3