Pre_GI: BLASTN Hits

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Query: NC_015379:6226661 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 6226661, End: 6265235, Length: 38575

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:24829012482901250376220862Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,04078BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome01318BLASTN svgBLASTP svg
NC_004578:568236*56823659272224487Pseudomonas syringae pv. tomato str. DC3000, complete genome01255BLASTN svgBLASTP svg
NC_015733:443122*44312246159918478Pseudomonas putida S16 chromosome, complete genome01231BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome01203BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome01053BLASTN svgBLASTP svg
NC_009434:796878*79687882874331866Pseudomonas stutzeri A1501, complete genome0965BLASTN svgBLASTP svg
NC_008463:632869*63286965598423116Pseudomonas aeruginosa UCBPP-PA14, complete genome0961BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-132482BLASTN svgBLASTP svg
NC_011071:4000620*4000620403191731298Stenotrophomonas maltophilia R551-3, complete genome3e-121444BLASTN svgBLASTP svg
NC_014837:3739408*3739408376471125304Pantoea sp. At-9b chromosome, complete genome1e-120442BLASTN svgBLASTP svg
NC_007508:4476726*4476726449836521640Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-119438BLASTN svgBLASTP svg
NC_015947:3991696*3991696401521623521Burkholderia sp. JV3 chromosome, complete genome2e-119438BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-116428BLASTN svgBLASTP svg
NC_008260:2340824*2340824238894248119Alcanivorax borkumensis SK2, complete genome1e-114422BLASTN svgBLASTP svg
NC_007086:4489153*4489153450718918037Xanthomonas campestris pv. campestris str. 8004, complete genome3e-109404BLASTN svgBLASTP svg
NC_003902:4430621*4430621444960618986Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-109404BLASTN svgBLASTP svg
NC_010552:752007*75200777809926093Burkholderia ambifaria MC40-6 chromosome 2, complete sequence6e-107396BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-104389BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-104389BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-102383BLASTN svgBLASTP svg
NC_014323:961825*96182598122819404Herbaspirillum seropedicae SmR1 chromosome, complete genome6e-101377BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome6e-98367BLASTN svgBLASTP svg
NC_012721:1986436*1986436201260326168Burkholderia glumae BGR1 chromosome 2, complete genome1e-95359BLASTN svgBLASTP svg
NC_009831:1255995*1255995127895522961Shewanella sediminis HAW-EB3, complete genome2e-94355BLASTN svgBLASTP svg
NC_006351:2398403*2398403241919020788Burkholderia pseudomallei K96243 chromosome 2, complete sequence1e-92349BLASTN svgBLASTP svg
NC_007650:722961*72296174620423244Burkholderia thailandensis E264 chromosome II, complete sequence3e-90341BLASTN svgBLASTP svg
NC_009078:2351046*2351046237054119496Burkholderia pseudomallei 1106a chromosome II, complete sequence8e-88333BLASTN svgBLASTP svg
NC_009075:2428248*2428248244904320796Burkholderia pseudomallei 668 chromosome II, complete sequence8e-88333BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-85325BLASTN svgBLASTP svg
NC_007435:1077792*1077792110044222651Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-85325BLASTN svgBLASTP svg
NC_014623:7331860*7331860735320421345Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-82315BLASTN svgBLASTP svg
NC_012969:2476318*2476318252045544138Methylovorus glucosetrophus SIP3-4 chromosome, complete genome3e-81311BLASTN svgBLASTP svg
NC_007645:6407370*6407370643016222793Hahella chejuensis KCTC 2396, complete genome1e-80309BLASTN svgBLASTP svg
NC_014733:2363838*2363838239108027243Methylovorus sp. MP688 chromosome, complete genome2e-79305BLASTN svgBLASTP svg
NC_015856:1182974*1182974120901726044Collimonas fungivorans Ter331 chromosome, complete genome7e-73283BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-71280BLASTN svgBLASTP svg
NC_008149:587689*58768961062122933Yersinia pestis Nepal516, complete genome3e-69272BLASTN svgBLASTP svg
NC_007947:2447635*2447635249025042616Methylobacillus flagellatus KT, complete genome2e-63252BLASTN svgBLASTP svg
NC_007912:909112*90911293451825407Saccharophagus degradans 2-40, complete genome6e-61244BLASTN svgBLASTP svg
NC_009952:2381601*2381601241824736647Dinoroseobacter shibae DFL 12, complete genome2e-60242BLASTN svgBLASTP svg
NC_010676:2869936*2869936289564625711Burkholderia phytofirmans PsJN chromosome 2, complete sequence9e-60240BLASTN svgBLASTP svg
NC_018691:28109492810949283752026572Alcanivorax dieselolei B5 chromosome, complete genome5e-58234BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete5e-55224BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete2e-54222BLASTN svgBLASTP svg
NC_009053:1668500*1668500169468326184Actinobacillus pleuropneumoniae L20, complete genome1e-46196BLASTN svgBLASTP svg
NC_010939:1633000*1633000166140328404Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete7e-42180BLASTN svgBLASTP svg
NC_007509:64400064400066633222333Burkholderia sp. 383 chromosome 3, complete sequence7e-42180BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome4e-40174BLASTN svgBLASTP svg
NC_013510:1849751*1849751187248222732Thermomonospora curvata DSM 43183, complete genome4e-34155BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-31147BLASTN svgBLASTP svg
NC_012968:2228943*2228943225222323281Methylotenera mobilis JLW8, complete genome4e-31145BLASTN svgBLASTP svg
NC_013282:923500*92350094659923100Cronobacter turicensis, complete genome2e-29139BLASTN svgBLASTP svg
NC_009727:357206*35720637934622141Coxiella burnetii Dugway 7E9-12, complete genome6e-27131BLASTN svgBLASTP svg
NC_002971:1523065*1523065154336920305Coxiella burnetii RSA 493, complete genome6e-27131BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome6e-24121BLASTN svgBLASTP svg
NC_013722:31174423117442314053923098Xanthomonas albilineans, complete genome6e-24121BLASTN svgBLASTP svg
NC_014314:755166*75516678070725542Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete4e-22115BLASTN svgBLASTP svg
NC_012856:3000839*3000839302487724039Ralstonia pickettii 12D chromosome 1, complete genome3e-19105BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome1e-18103BLASTN svgBLASTP svg
NC_013715:767722*76772279120723486Rothia mucilaginosa DY-18, complete genome5e-18101BLASTN svgBLASTP svg
NC_008529:1042220*1042220107983637617Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete5e-18101BLASTN svgBLASTP svg
NC_007963:11908471190847124782656980Chromohalobacter salexigens DSM 3043, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_011992:86317486317488672923556Acidovorax ebreus TPSY, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_010645:36940836940840678237375Bordetella avium 197N, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_007644:626992*62699269973472743Moorella thermoacetica ATCC 39073, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015713:2453409*2453409249799944591Simkania negevensis Z chromosome gsn.131, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008054:1030994*1030994106151930526Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete3e-1385.7BLASTN svgBLASTP svg
NC_010424:531727*53172755409922373Candidatus Desulforudis audaxviator MP104C, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015152:2528399*2528399254787419476Spirochaeta sp. Buddy chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015714:741044*74104476557024527Treponema paraluiscuniculi Cuniculi A chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010741:74535774535776827622920Treponema pallidum subsp. pallidum SS14, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_000919:74687574687576682819954Treponema pallidum subsp. pallidum str. Nichols, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008060:2913671*2913671294708933419Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence8e-1177.8BLASTN svgBLASTP svg
NC_008542:483761*48376151469930939Burkholderia cenocepacia HI2424 chromosome 1, complete sequence8e-1177.8BLASTN svgBLASTP svg
NC_010682:3313944*3313944336341949476Ralstonia pickettii 12J chromosome 1, complete sequence8e-1177.8BLASTN svgBLASTP svg
NC_013510:3065000*3065000309079525796Thermomonospora curvata DSM 43183, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_014484:1163576*1163576120142437849Spirochaeta thermophila DSM 6192 chromosome, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_009465:90000*9000013018540186Candidatus Vesicomyosocius okutanii HA, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007974:11358631135863115837322511Ralstonia metallidurans CH34 chromosome 2, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_007298:1824335*1824335184843524101Dechloromonas aromatica RCB, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015458:2338437*2338437237239533959Pusillimonas sp. T7-7 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015436:1758257*1758257178406425808Spirochaeta coccoides DSM 17374 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007651:72952*7295214574172790Burkholderia thailandensis E264 chromosome I, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_007880:50840750840753094422538Francisella tularensis subsp. holarctica, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_008369:51499551499553466619672Francisella tularensis subsp. holarctica OSU18, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_006322:2592176*2592176261693124756Bacillus licheniformis ATCC 14580, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007404:35976435976438550125738Thiobacillus denitrificans ATCC 25259, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010682:28841528841531019821784Ralstonia pickettii 12J chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_006270:2591317*2591317261497023654Bacillus licheniformis ATCC 14580, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_019907:920797*92079794568724891Liberibacter crescens BT-1 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015677:3520524*3520524354474924226Ramlibacter tataouinensis TTB310 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008541:1503835*1503835152678622952Arthrobacter sp. FB24 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_002935:1378566*1378566145023271667Corynebacterium diphtheriae NCTC 13129, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015856:38320003832000385524023241Collimonas fungivorans Ter331 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome5e-0661.9BLASTN svgBLASTP svg