Pre_GI: BLASTN Hits

Some Help

Query: NC_015379:4249238 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 4249238, End: 4275626, Length: 26389

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000913:4462782*4462782448642323642Escherichia coli K12, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010473:4564590*4564590458823123642Escherichia coli str. K-12 substr. DH10B, complete genome5e-1177.8BLASTN svgBLASTP svg
AC_000091:4472000*4472000449474322744Escherichia coli W3110 DNA, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011146:482440*48244051159929160Geobacter bemidjiensis Bem, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010125:10114301011430103468823259Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_016027:25804772580477259977719301Gluconacetobacter xylinus NBRC 3288, complete genome2e-26129BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-35159BLASTN svgBLASTP svg
NC_020126:73726857372685739764324959Myxococcus stipitatus DSM 14675, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013956:66329566329568566022366Pantoea ananatis LMG 20103 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1487.7BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-29139BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-0867.9BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012660:46695004669500468960120102Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008314:26118732611873263563323761Ralstonia eutropha H16 chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-1487.7BLASTN svgBLASTP svg
NC_006905:17660001766000178860222603Salmonella enterica subsp. enterica serovar Choleraesuis str5e-1487.7BLASTN svgBLASTP svg
NC_011080:17500001750000177244622447Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1179.8BLASTN svgBLASTP svg
NC_003198:13368941336894136036523472Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1179.8BLASTN svgBLASTP svg
NC_004631:16235111623511164614622636Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-1179.8BLASTN svgBLASTP svg
NC_003197:17536631753663177609922437Salmonella typhimurium LT2, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_010658:4494103*4494103451209917997Shigella boydii CDC 3083-94, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_016010:1247008*1247008127542528418Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete2e-63252BLASTN svgBLASTP svg
NC_003902:12206001220600124640025801Xanthomonas campestris pv. campestris str. ATCC 33913, complete8e-1073.8BLASTN svgBLASTP svg