Pre_GI: BLASTN Hits

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Query: NC_015379:2999965 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 2999965, End: 3022003, Length: 22039

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012660:165559*16555920054534987Pseudomonas fluorescens SBW25 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_012791:23860002386000240897722978Variovorax paradoxus S110 chromosome 1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013851:33002783300278332129021013Allochromatium vinosum DSM 180 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg