Pre_GI: BLASTN Hits

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Query: NC_015379:2505233 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 2505233, End: 2546694, Length: 41462

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004578:1719849*1719849174221722369Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-30143BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome4e-22115BLASTN svgBLASTP svg
NC_002927:37168943716894377039253499Bordetella bronchiseptica RB50, complete genome2e-20109BLASTN svgBLASTP svg
NC_012796:12950012950014715917660Desulfovibrio magneticus RS-1, complete genome6e-18101BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_015663:37427383742738376655823821Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005363:35622053562205359309930895Bdellovibrio bacteriovorus HD100, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010625:14656031465603148359917997Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence9e-1487.7BLASTN svgBLASTP svg
NC_008700:1115436*1115436114339927964Shewanella amazonensis SB2B, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_015572:37234983723498374383520338Methylomonas methanica MC09 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015633:46114346114348763326491Vibrio anguillarum 775 chromosome chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_004578:51921105192110522245930350Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_007005:16368751636875167981442940Pseudomonas syringae pv. syringae B728a, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_007644:20998782099878212213022253Moorella thermoacetica ATCC 39073, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_012660:37448683744868377123626369Pseudomonas fluorescens SBW25 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_015424:23162282316228235664140414Aeromonas veronii B565 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014831:22247332224733225059925867Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008570:1094442*1094442111732922888Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_006370:84720484720486812520922Photobacterium profundum SS9 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008577:3738758*3738758376351324756Shewanella sp. ANA-3 chromosome 1, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_007963:31137393113739313569421956Chromohalobacter salexigens DSM 3043, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome5e-0661.9BLASTN svgBLASTP svg