Pre_GI: BLASTN Hits

Some Help

Query: NC_015379:2482901 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 2482901, End: 2503762, Length: 20862

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:6226661*6226661626523538575Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,04078BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome0918BLASTN svgBLASTP svg
NC_018691:28109492810949283752026572Alcanivorax dieselolei B5 chromosome, complete genome5e-60240BLASTN svgBLASTP svg
NC_013282:923500*92350094659923100Cronobacter turicensis, complete genome1e-26129BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_014931:1642179*1642179167070028522Variovorax paradoxus EPS chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_012880:1127997*1127997115596427968Dickeya dadantii Ech703, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009512:32515453251545327720325659Pseudomonas putida F1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012660:4558122*4558122459234134220Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010067:4149298*4149298416723717940Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-0869.9BLASTN svgBLASTP svg
NC_007298:1824335*1824335184843524101Dechloromonas aromatica RCB, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012850:3454270*3454270347928825019Rhizobium leguminosarum bv. trifolii WSM1325, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007005:3414579*3414579344125226674Pseudomonas syringae pv. syringae B728a, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012792:96229296229299068328392Variovorax paradoxus S110 chromosome 2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015183:2483653*2483653251000626354Agrobacterium sp. H13-3 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_016002:24539192453919250029546377Pseudogulbenkiania sp. NH8B, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015567:1127780*1127780116575637977Serratia sp. AS9 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015566:1127595*1127595116557137977Serratia sp. AS12 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003304:2507000*2507000253013123132Agrobacterium tumefaciens str. C58 chromosome circular, complete2e-0661.9BLASTN svgBLASTP svg
NC_006511:3364448*3364448338809923652Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-0661.9BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007509:719547195411100139048Burkholderia sp. 383 chromosome 3, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_011666:15724871572487160176329277Methylocella silvestris BL2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014733:12233591223359125683633478Methylovorus sp. MP688 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003062:2506959*2506959252983722879Agrobacterium tumefaciens str. C58 chromosome circular, complete2e-0661.9BLASTN svgBLASTP svg
NC_010814:36739833673983369691022928Geobacter lovleyi SZ, complete genome1e-0560BLASTN svgBLASTP svg