Pre_GI: BLASTN Hits

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Query: NC_015312:3290887 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Start: 3290887, End: 3312103, Length: 21217

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome01931BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome01806BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome7e-50206BLASTN svgBLASTP svg
NC_015312:63574696357469638125623788Pseudonocardia dioxanivorans CB1190 chromosome, complete genome6e-41176BLASTN svgBLASTP svg
NC_014830:16021981602198162425922062Intrasporangium calvum DSM 43043 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014831:22247332224733225059925867Thermaerobacter marianensis DSM 12885 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_020302:858218582114074254922Corynebacterium halotolerans YIM 70093 = DSM 44683, complete1e-1489.7BLASTN svgBLASTP svg
NC_011420:3822765*3822765384728424520Rhodospirillum centenum SW, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013757:1343396*1343396136140718012Geodermatophilus obscurus DSM 43160, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015312:68167868167870428822611Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013093:2230171*2230171225498024810Actinosynnema mirum DSM 43827, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015186:29083872908387292758619200Acidiphilium multivorum AIU301, complete genome1e-0560BLASTN svgBLASTP svg
NC_014318:5586287*5586287562248536199Amycolatopsis mediterranei U32 chromosome, complete genome1e-0560BLASTN svgBLASTP svg