Pre_GI: BLASTN Hits

Some Help

Query: NC_015275:911999 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 911999, End: 934384, Length: 22386

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete2e-0765.9BLASTN svgBLASTP svg
NC_006582:883922*88392291459930678Bacillus clausii KSM-K16, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014219:567033*56703358681719785Bacillus selenitireducens MLS10 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014976:2735423*2735423276136725945Bacillus subtilis BSn5 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014479:509919*50991953986229944Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_016047:637778*63777866096423187Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_000964:521975*52197556193339959Bacillus subtilis subsp. subtilis str. 168, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019896:3491000*3491000352473533736Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_020244:516993*51699355115334161Bacillus subtilis XF-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010001:434803*43480346465129849Clostridium phytofermentans ISDg, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003454:249304*24930426978820485Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete3e-0661.9BLASTN svgBLASTP svg
NC_003212:25926002592600261244219843Listeria innocua Clip11262, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008555:12040001204000124219438195Listeria welshimeri serovar 6b str. SLCC5334, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004193:79588*7958811154731960Oceanobacillus iheyensis HTE831, complete genome2e-0765.9BLASTN svgBLASTP svg