Query: NC_015275:3299923 Clostridium lentocellum DSM 5427 chromosome, complete genome
Start: 3299923, End: 3321268, Length: 21346
Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010723:1133163* | 1133163 | 1151107 | 17945 | Clostridium botulinum E3 str. Alaska E43, complete genome | 4e-33 | 151 | BLASTN svg | BLASTP svg |
NC_010674:1170264 | 1170264 | 1192433 | 22170 | Clostridium botulinum B str. Eklund 17B, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_020291:1266885 | 1266885 | 1307372 | 40488 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_014393:4988127 | 4988127 | 5010039 | 21913 | Clostridium cellulovorans 743B chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_015391:1323171* | 1323171 | 1346099 | 22929 | Carnobacterium sp. 17-4 chromosome, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_021182:4882494 | 4882494 | 4908599 | 26106 | Clostridium pasteurianum BC1, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014328:4546390* | 4546390 | 4570096 | 23707 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010516:3903867* | 3903867 | 3950598 | 46732 | Clostridium botulinum B1 str. Okra, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011661:961129* | 961129 | 984261 | 23133 | Dictyoglomus turgidum DSM 6724, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_004557:81362* | 81362 | 104177 | 22816 | Clostridium tetani E88, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010184:4425676 | 4425676 | 4448719 | 23044 | Bacillus weihenstephanensis KBAB4, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015557:1333158* | 1333158 | 1358355 | 25198 | Hydrogenobaculum sp. 3684 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_020411:1333352* | 1333352 | 1358549 | 25198 | Hydrogenobaculum sp. HO, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012563:4101000* | 4101000 | 4122653 | 21654 | Clostridium botulinum A2 str. Kyoto, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_016012:805680* | 805680 | 827841 | 22162 | Candidatus Arthromitus sp. SFB-rat-Yit, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010520:3938490* | 3938490 | 3976099 | 37610 | Clostridium botulinum A3 str. Loch Maree, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014774:1120383* | 1120383 | 1155508 | 35126 | Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015687:3766000* | 3766000 | 3791146 | 25147 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013798:345339* | 345339 | 372216 | 26878 | Streptococcus gallolyticus UCN34, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003030:3763054* | 3763054 | 3789651 | 26598 | Clostridium acetobutylicum ATCC 824, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014150:2088012* | 2088012 | 2121099 | 33088 | Brachyspira murdochii DSM 12563 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_008593:37456* | 37456 | 60806 | 23351 | Clostridium novyi NT, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |