Pre_GI: BLASTN Hits

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Query: NC_015275:1480500 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 1480500, End: 1502331, Length: 21832

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015275:2712991*2712991273229719307Clostridium lentocellum DSM 5427 chromosome, complete genome1e-66262BLASTN svgBLASTP svg
NC_015275:3680323*3680323369859918277Clostridium lentocellum DSM 5427 chromosome, complete genome8e-59236BLASTN svgBLASTP svg
NC_015275:82072382072384506424342Clostridium lentocellum DSM 5427 chromosome, complete genome3e-55224BLASTN svgBLASTP svg
NC_015275:34073583407358344643139074Clostridium lentocellum DSM 5427 chromosome, complete genome1e-45192BLASTN svgBLASTP svg
NC_015275:65495965495967416419206Clostridium lentocellum DSM 5427 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015275:1034230*1034230105448120252Clostridium lentocellum DSM 5427 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010003:13604721360472142326562794Petrotoga mobilis SJ95, complete genome3e-0661.9BLASTN svgBLASTP svg