Query: NC_015275:1034230 Clostridium lentocellum DSM 5427 chromosome, complete genome
Start: 1034230, End: 1054481, Length: 20252
Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015275:986382 | 986382 | 1007804 | 21423 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 0 | 3943 | BLASTN svg | BLASTP svg |
NC_015275:2712991* | 2712991 | 2732297 | 19307 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 5e-26 | 127 | BLASTN svg | BLASTP svg |
NC_015275:654959 | 654959 | 674164 | 19206 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_015275:3407358 | 3407358 | 3446431 | 39074 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015275:1480500 | 1480500 | 1502331 | 21832 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015275:820723 | 820723 | 845064 | 24342 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015275:3594890* | 3594890 | 3635887 | 40998 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015161:792955* | 792955 | 817096 | 24142 | Deinococcus proteolyticus MRP chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010376:186510* | 186510 | 243099 | 56590 | Finegoldia magna ATCC 29328, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013165:3146000* | 3146000 | 3180499 | 34500 | Slackia heliotrinireducens DSM 20476, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013721:430000* | 430000 | 452141 | 22142 | Gardnerella vaginalis 409-05, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011830:3369282* | 3369282 | 3392405 | 23124 | Desulfitobacterium hafniense DCB-2, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_007907:2306561* | 2306561 | 2351565 | 45005 | Desulfitobacterium hafniense Y51, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |