Some Help

Query: NC_015275:911999:932981 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 932981, End: 934384, Length: 1404

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011660:2541632:2558752255875225598971146Listeria monocytogenes HCC23 chromosome, complete genomemajor capsid protein4e-1066.6
NC_015697:506494:5281265281265293041179Lactobacillus reuteri SD2112 chromosome, complete genomeHK97 family major capsid protein6e-0962.4
NC_014393:4775452:4800046480004648012241179Clostridium cellulovorans 743B chromosome, complete genomephage major capsid protein, HK97 family5e-0756.2
NC_020272:1311932:1342665134266513439571293Bacillus amyloliquefaciens IT-45, complete genomephage major capsid protein, HK97 family6e-0755.8
UCMB5137:120656:1363761363761376771302Bacillus atrophaeus UCMB-5137phage major capsid protein, HK97 family3e-0653.5
NC_013174:2321000:234740223474022348364963Jonesia denitrificans DSM 20603, complete genomemajor capsid protein HK976e-0652.8