Pre_GI: BLASTP Hits

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Query: NC_015275:911999:924663 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 924663, End: 926183, Length: 1521

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017297:2531750:2560278256027825617081431Clostridium botulinum F str. 230613 chromosome, complete genomeC-5 cytosine-specific DNA methylase5e-177620
NC_009699:2552195:2560139256013925615691431Clostridium botulinum F str. Langeland chromosome, complete genomeC-5 cytosine-specific DNA methylase5e-177620
NC_012914:1851102:1875205187520518768811677Paenibacillus sp. JDR-2, complete genomeC-5 cytosine-specific DNA methylase1e-164579
NC_014837:2354241:2368175236817523699291755Pantoea sp. At-9b chromosome, complete genomeC-5 cytosine-specific DNA methylase4e-142504
NC_020272:1311932:1329388132938813307641377Bacillus amyloliquefaciens IT-45, complete genomeC-5 cytosine-specific DNA methylase4e-136485
NC_014551:576000:5869135869135882891377Bacillus amyloliquefaciens DSM 7, complete genomeC-5 cytosine-specific DNA methylase8e-136484
NC_008786:4040864:4040864404086440423481485Verminephrobacter eiseniae EF01-2, complete genomeC-5 cytosine-specific DNA methylase7e-123441
NC_009648:1541699:1557676155767615595351860Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative site-specific DNA methylase5e-123441
NC_020181:5217000:5239111523911152409611851Enterobacter aerogenes EA1509E, complete genomeFIG00731669: hypothetical protein9e-121434
NC_015690:1186545:1203559120355912047491191Paenibacillus mucilaginosus KNP414 chromosome, complete genomeC-5 cytosine-specific DNA methylase5e-108392
NC_016816:1970189:1975893197589319779712079Pantoea ananatis LMG 5342, complete genomeC-5 cytosine-specific DNA methylase4e-107389
NC_017033:1557981:1559439155943915610941656Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific DNA methylase6e-98358
NC_012731:2083650:2102675210267521046451971Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative site-specific DNA methylase4e-96352
NC_004578:3849835:3862800386280038645841785Pseudomonas syringae pv. tomato str. DC3000, complete genomeC-5 cytosine-specific DNA methylase family protein3e-91336
NC_014910:3727887:3732288373228837343482061Alicycliphilus denitrificans BC chromosome, complete genomec-5 cytosine-specific DNA methylase3e-89329
NC_009720:4087831:4101674410167441034131740Xanthobacter autotrophicus Py2, complete genomeC-5 cytosine-specific DNA methylase2e-76287
NC_017986:4931104:4948578494857849505211944Pseudomonas putida ND6 chromosome, complete genomeC-5 cytosine-specific DNA methylase3e-68259
NC_002947:3404000:3415408341540834172371830Pseudomonas putida KT2440, complete genomeDNA cytosine methyltransferase family protein6e-68258
NC_007005:3414579:3415442341544234175742133Pseudomonas syringae pv. syringae B728a, complete genomeC-5 cytosine-specific DNA methylase3e-65249
NC_010125:3667452:3667452366745236685161065Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-43177
NC_011283:2836000:2905357290535729069281572Klebsiella pneumoniae 342 chromosome, complete genomeDNA modification methylase2e-42174
NC_020054:4983691:5002860500286050049892130Fibrella aestuarina BUZ 2 drat genomeDNA (cytosine-5-)-methyltransferase2e-42174
NC_015914:279413:2936442936442955961953Cyclobacterium marinum DSM 745 chromosome, complete genomeC-5 cytosine-specific DNA methylase5e-40166
NC_017186:361444:3710673710673726921626Amycolatopsis mediterranei S699 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase1e-28127
NC_003155:6667928:6702263670226367038101548Streptomyces avermitilis MA-4680, complete genometype II restriction-modification system DNA cytosine-specific methylase4e-27123
NC_013729:2287884:2288120228812022896641545Kribbella flavida DSM 17836, complete genomeC-5 cytosine-specific DNA methylase2e-26120
NC_016111:3736254:3746333374633337477931461Streptomyces cattleya NRRL 8057, complete genomeSite-specific DNA methylase2e-1997.4
NC_014836:1551965:158589615858961586816921Desulfurispirillum indicum S5 chromosome, complete genomeDNA-cytosine methyltransferase2e-1790.9
NC_008278:744777:7534787534787546831206Frankia alni ACN14a, complete genomeputative DNA Modification methylase (Cytosine-specific methyltransferase)3e-1790.5
NC_013947:6585847:6612001661200166136591659Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeC-5 cytosine-specific DNA methylase5e-1686.3
NC_008702:369965:377176377176378156981Azoarcus sp. BH72, complete genomeputative methylase1e-1585.1
NC_020541:468584:4823134823134833261014Rhodanobacter sp. 2APBS1, complete genomeDNA-methyltransferase Dcm1e-1584.7
NC_017214:658821:6700686700686716091542Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeDNA-cytosine methyltransferase2e-1377.4
NC_017215:22616:3444934449359901542Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,DNA (cytosine-5-)-methyltransferase2e-1377.4
NC_017217:23000:3460034600359611362Bifidobacterium animalis subsp. lactis V9 chromosome, completesite-specific DNA-methyltransferase3e-1377
NC_017216:22454:3446734467358281362Bifidobacterium animalis subsp. lactis BLC1, complete genomeDNA-cytosine methyltransferase3e-1377
NC_011835:23204:3463134631359921362Bifidobacterium animalis subsp. lactis AD011 chromosome, completemodification methylase SinI3e-1377
NC_012814:23000:3460034600359611362Bifidobacterium animalis subsp. lactis Bl-04, complete genomesite-specific DNA-methyltransferase3e-1377
NC_012815:23000:3460034600359611362Bifidobacterium animalis subsp. lactis DSM 10140, complete genomesite-specific DNA-methyltransferase3e-1377
NC_016612:5231065:5247595524759552486531059Klebsiella oxytoca KCTC 1686 chromosome, complete genomemodification methylase1e-1275.1
NC_018581:3323500:332612033261203326875756Gordonia sp. KTR9 chromosome, complete genomeC-5 cytosine-specific DNA methylase component4e-1273.2
NC_009663:2531876:2534545253454525356331089Sulfurovum sp. NBC37-1, complete genomecytosine-specific methyltransferase7e-1272.4
NC_010572:3925803:3937738393773839388291092Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative SacI methylase1e-1172
NC_015846:24771:3549435494365701077Capnocytophaga canimorsus Cc5 chromosome, complete genomeMHphi(C)1e-1171.6
NC_016582:7033000:7043569704356970455631995Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-cytosine methyltransferase1e-1171.6
NC_014010:1489910:1504606150460615057871182Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA-cytosine methyltransferase3e-1170.1
NC_009972:606393:6142136142136152771065Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeDNA-cytosine methyltransferase9e-1168.9
NC_013854:1686997:1693424169342416945511128Azospirillum sp. B510, complete genomeDNA (cytosine-5-)-methyltransferase9e-1168.9
NC_010814:243384:2753502753502764771128Geobacter lovleyi SZ, complete genomeDNA-cytosine methyltransferase9e-1168.6
NC_003911:1078949:1096391109639110975121122Silicibacter pomeroyi DSS-3, complete genomeDNA methylase, C-5 cytosine-specific family1e-1068.6
NC_013441:1487058:1514873151487315159011029Gordonia bronchialis DSM 43247, complete genomeDNA-cytosine methyltransferase2e-1067.4
NC_014393:4775452:4832935483293548340261092Clostridium cellulovorans 743B chromosome, complete genomeDNA-cytosine methyltransferase3e-1067
NC_020995:3300751:3309845330984533109871143Enterococcus casseliflavus EC20, complete genomeDNA (cytosine-5-)-methyltransferase3e-1067
NC_011831:1693935:1703816170381617049041089Chloroflexus aggregans DSM 9485, complete genomeDNA-cytosine methyltransferase4e-1066.6
NC_014479:3939183:3948253394825339497191467Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeDNA (cytosine-5-)-methyltransferase6e-1066.2
NC_015385:1875671:189941118994111899695285Treponema succinifaciens DSM 2489 chromosome, complete genomeC-5 cytosine-specific DNA methylase8e-1065.9
NC_016109:3963189:3983220398322039852502031Kitasatospora setae KM-6054, complete genomeputative DNA methyltransferase1e-0965.1
NC_015913:1248000:1267618126761812687451128Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomecytosine-specific methyltransferase2e-0964.3
NC_012521:1:8108810893941287Rhodococcus opacus B4 plasmid pROB02, complete sequencemodification methylase2e-0964.3
NC_013757:780835:8019758019758039902016Geodermatophilus obscurus DSM 43160, complete genomeDNA-cytosine methyltransferase3e-0963.5
NC_011144:2770842:2775586277558627771121527Phenylobacterium zucineum HLK1, complete genomeDNA (cytosine-5-)-methyltransferase protein5e-0963.2
NC_009073:529148:544028544028544969942Pyrobaculum calidifontis JCM 11548, complete genomeDNA-cytosine methyltransferase5e-0963.2
NC_013956:3525711:353540635354063536347942Pantoea ananatis LMG 20103 chromosome, complete genomeHsdRM9e-0962.4
NC_013510:5499447:5509398550939855106541257Thermomonospora curvata DSM 43183, complete genomeDNA-cytosine methyltransferase7e-0962.4
NC_019673:1275627:1279907127990712810041098Saccharothrix espanaensis DSM 44229 complete genomeDNA-cytosine methyltransferase7e-0962.4
NC_013131:9903320:9910962991096299121311170Catenulispora acidiphila DSM 44928, complete genomeDNA-cytosine methyltransferase2e-0861.2
NC_014815:6779538:6786245678624567874831239Micromonospora sp. L5 chromosome, complete genomeDNA-cytosine methyltransferase2e-0860.8
NC_010125:3854957:3859994385999438613011308Gluconacetobacter diazotrophicus PAl 5, complete genomeputative cytosine-specifi methyltransferase DdeI4e-0860.1
NC_015593:2553500:2571208257120825724641257Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA-cytosine methyltransferase4e-0860.1
NC_012778:1819559:1853605185360518550381434Eubacterium eligens ATCC 27750, complete genomeDNA (cytosine-5-)-methyltransferase6e-0859.7
NC_008570:1143578:1175428117542811767501323Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomemodification methylase DdeI5e-0859.7
NC_011059:2478075:2491044249104424920661023Prosthecochloris aestuarii DSM 271, complete genomeDNA-cytosine methyltransferase6e-0859.3
NC_016947:2210339:2227999222799922300082010Mycobacterium intracellulare MOTT-02 chromosome, complete genomeDNA-cytosine methyltransferase8e-0858.9
NC_009802:352641:3607393607393622081470Campylobacter concisus 13826, complete genomeputative two-component sensor8e-0858.9
NC_009380:636000:6385536385536405111959Salinispora tropica CNB-440 chromosome, complete genomeDNA-cytosine methyltransferase1e-0758.5
NC_008800:1870596:1876566187656618779241359Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,prophage encoded DNA modification methylase1e-0758.5
NC_010511:1641416:1643663164366316449671305Methylobacterium sp. 4-46 chromosome, complete genomeDNA-cytosine methyltransferase2e-0758.2
NC_013132:782846:7838817838817850531173Chitinophaga pinensis DSM 2588, complete genomeDNA-cytosine methyltransferase1e-0758.2
NC_017186:10070795:1007843810078438100797451308Amycolatopsis mediterranei S699 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-0757.4
NC_014318:10070730:1007837310078373100796801308Amycolatopsis mediterranei U32 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-0757.4
NC_020388:1100759:1119051111905111201631113Natronomonas moolapensis 8.8.11 complete genomesite-specific DNA-methyltransferase (cytosine-specific)3e-0757.4
NC_019792:153661:1747091747091759201212Natronobacterium gregoryi SP2 chromosome, complete genomeDNA-methyltransferase Dcm3e-0757
NC_007494:867901:8858008858008871311332Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceCytosine-specific DNA methylase3e-0757
NC_004663:6223442:6237974623797462391821209Bacteroides thetaiotaomicron VPI-5482, complete genomeputative cytosine-specific methyltransferase6e-0756.2
NC_017167:2298962:2320814232081423220431230Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA-cytosine methyltransferase6e-0756.2
NC_010120:1065833:1077592107759210786141023Neisseria meningitidis 053442, complete genomemodification methylase (cytosine-specific DNA methylase)5e-0756.2
NC_015945:218326:2265942265942278291236Muricauda ruestringensis DSM 13258 chromosome, complete genomeDNA-cytosine methyltransferase5e-0756.2
NC_008818:1127575:114761511476151148574960Hyperthermus butylicus DSM 5456, complete genomeSite-specific DNA methylase5e-0756.2
NC_013410:1152188:1159106115910611603621257Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DNA-cytosine methyltransferase1e-0655.5
NC_011283:3379181:3410092341009234111351044Klebsiella pneumoniae 342 chromosome, complete genomeDNA-cytosine methyltransferase9e-0755.5
NC_016510:1749967:1749967174996717511841218Flavobacterium columnare ATCC 49512 chromosome, complete genomecytosine-specific methyltransferase1e-0655.1
NC_014828:1335154:1363419136341913647351317Ethanoligenens harbinense YUAN-3 chromosome, complete genomeDNA-cytosine methyltransferase1e-0655.1
NC_016885:237682:252994252994253950957Pyrobaculum oguniense TE7 chromosome, complete genomeDNA-methyltransferase (dcm)2e-0654.3
NC_006958:1872849:1879784187978418808751092Corynebacterium glutamicum ATCC 13032, complete genomeMODIFICATION METHYLASE2e-0654.3
NC_008554:1623041:1635995163599516372841290Syntrophobacter fumaroxidans MPOB, complete genomeDNA-cytosine methyltransferase3e-0653.9
NC_009376:1633283:164543816454381646394957Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeDNA-cytosine methyltransferase3e-0653.5
NC_009511:2726296:2734248273424827354861239Sphingomonas wittichii RW1 chromosome, complete genomeDNA-cytosine methyltransferase5e-0652.8
NC_003450:1871377:1878333187833318794031071Corynebacterium glutamicum ATCC 13032, complete genomesite-specific DNA methylase or6e-0652.8
NC_010337:2793667:280986828098682810827960Heliobacterium modesticaldum Ice1, complete genomeDNA-cytosine methyltransferase7e-0652.8
NC_008702:815264:8247548247548260581305Azoarcus sp. BH72, complete genomeprobable C-5 cytosine-specific DNA methylase8e-0652.4
NC_016791:3891272:389535538953553896338984Clostridium sp. BNL1100 chromosome, complete genomeDNA-methyltransferase Dcm8e-0652.4
NC_010501:734363:7487427487427497941053Pseudomonas putida W619, complete genomeC-5 cytosine-specific DNA methylase8e-0652.4