Pre_GI: BLASTP Hits

Some Help

Query: NC_015275:911999:916822 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 916822, End: 917739, Length: 918

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014655:130636:153481153481154392912Leadbetterella byssophila DSM 17132 chromosome, complete genomeexonuclease rnase t and DNA polymerase iii4e-52204
NC_014639:2169277:219056321905632191189627Bacillus atrophaeus 1942 chromosome, complete genomeDNA polymerase III subunit epsilon2e-39162
CP002207:2169277:219056321905632191189627Bacillus atrophaeus 1942, complete genomeDNA polymerase III subunit epsilon2e-39162
UCMB5137:2128500:215436821543682154994627Bacillus atrophaeus UCMB-5137DNA polymerase III subunit epsilon2e-39162
NC_014727:2036340:205057920505792051475897Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii polc-type6e-34144
NC_007681:153476:1579261579261592631338Methanosphaera stadtmanae DSM 3091, complete genomepredicted 3'-5' exonuclease1e-30133
NC_014033:3462437:346957734695773470068492Prevotella ruminicola 23 chromosome, complete genomeexonuclease2e-27122
NC_016610:2605922:262806726280672628558492Tannerella forsythia ATCC 43037 chromosome, complete genomeexonuclease8e-26117
NC_007964:328825:3601823601823611861005Nitrobacter hamburgensis X14, complete genomeExonuclease2e-25116
NC_019968:1084288:108836410883641088855492Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA polymerase III epsilon subunit-like 3'-5' exonuclease2e-23110
NC_011958:976500:100118410011841002065882Rhodobacter sphaeroides KD131 chromosome 2, complete genomeExonuclease3e-22105
NC_019970:1343670:1355741135574113599734233Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA polymerase III, alpha chain7e-22104
NC_009674:2551759:2564124256412425684254302Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDNA polymerase III PolC9e-22104
NC_017179:1378875:1381865138186513861634299Clostridium difficile BI1, complete genomeDNA polymerase III PolC-type2e-21103
NC_013315:1370000:1372091137209113763894299Clostridium difficile CD196 chromosome, complete genomeDNA polymerase III PolC-type2e-21103
NC_011898:513835:5162685162685205694302Clostridium cellulolyticum H10, complete genomeDNA polymerase III, alpha subunit5e-21101
NC_014103:3985897:4000185400018540044954311Bacillus megaterium DSM319 chromosome, complete genomeDNA polymerase III subunit alpha7e-21101
NC_014643:2056280:2062776206277620640051230Rothia dentocariosa ATCC 17931 chromosome, complete genomeexonuclease2e-20100
NC_016887:1949927:197348819734881974084597Nocardia cyriacigeorgica GUH-2, complete genomeDNA polymerase III epsilon subunit and related 3'-5' exonucleases3e-2099
NC_009495:2524000:2553368255336825576664299Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA polymerase III PolC7e-2098.2
NC_009697:2394826:2425391242539124296894299Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA polymerase III PolC7e-2098.2
NC_009698:2367171:2397736239773624020344299Clostridium botulinum A str. Hall chromosome, complete genomeDNA polymerase III PolC7e-2098.2
NC_010184:3675424:3688149368814936924504302Bacillus weihenstephanensis KBAB4, complete genomeDNA polymerase III, alpha subunit1e-1997.4
NC_009253:2139379:2156194215619421604744281Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA polymerase III subunit alpha1e-1997.4
NC_003909:3606177:3606177360617736090892913Bacillus cereus ATCC 10987, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-1997.1
NC_004722:3777907:3790222379022237945294308Bacillus cereus ATCC 14579, complete genomeDNA polymerase III subunit alpha2e-1996.7
NC_011725:3821789:3834107383410738384084302Bacillus cereus B4264 chromosome, complete genomeDNA polymerase III PolC2e-1996.7
NC_014171:3701051:3713367371336737176684302Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III PolC2e-1996.7
NC_011772:3787500:3799826379982638041274302Bacillus cereus G9842, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-1996.7
NC_017208:3816753:3829460382946038337614302Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III PolC2e-1996.7
NC_016779:3579743:3596109359610935990212913Bacillus cereus F837/76 chromosome, complete genomeDNA polymerase III subunit alpha3e-1996.3
NC_008600:3643905:3660271366027136631892919Bacillus thuringiensis str. Al Hakam, complete genomeDNA polymerase III, alpha subunit3e-1996.3
NC_012472:3661912:3678278367827836811902913Bacillus cereus 03BB102, complete genomeDNA polymerase III, PolC-type3e-1996.3
NC_014335:3567931:3580242358024235845434302Bacillus cereus biovar anthracis str. CI chromosome, completeDNA polymerase III subunit alpha4e-1995.9
NC_005945:3615623:3630085363008536343864302Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit alpha4e-1995.9
NC_007530:3616828:3629517362951736338184302Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA polymerase III subunit alpha4e-1995.9
NC_006274:3697255:3709943370994337142444302Bacillus cereus E33L, complete genomeDNA polymerase III subunit alpha4e-1995.9
NC_003997:3617000:3629390362939036336914302Bacillus anthracis str. Ames, complete genomeDNA polymerase III subunit alpha4e-1995.9
NC_011773:3651963:3664276366427636685774302Bacillus cereus AH820 chromosome, complete genomeDNA polymerase III PolC4e-1995.9
NC_011969:3549000:3561396356139635656974302Bacillus cereus Q1 chromosome, complete genomeDNA polymerase iii polc4e-1995.9
NC_012581:559182:6048696048696091704302Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA polymerase III PolC4e-1995.9
NC_012659:3617000:3629417362941736337184302Bacillus anthracis str. A0248, complete genomeDNA polymerase III PolC4e-1995.9
NC_005957:3638750:3651061365106136553624302Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA polymerase III subunit alpha4e-1995.9
NC_011658:3603009:3617434361743436217354302Bacillus cereus AH187 chromosome, complete genomeDNA polymerase III PolC4e-1995.9
NC_016771:3555506:3569931356993135742324302Bacillus cereus NC7401, complete genomeDNA polymerase III subunit alpha4e-1995.9
NC_010516:2511035:2541591254159125458894299Clostridium botulinum B1 str. Okra, complete genomeDNA polymerase III, alpha subunit, Gram-positive type3e-1995.9
NC_015554:4724245:4724245472424547263772133Alteromonas sp. SN2 chromosome, complete genomeDNA polymerase III, epsilon subunit3e-1995.9
NC_014152:1430156:1433347143334714376754329Thermincola sp. JR, complete genomeDNA polymerase III, alpha subunit3e-1995.9
NC_010520:2585014:2616121261612126204194299Clostridium botulinum A3 str. Loch Maree, complete genomeDNA polymerase III, alpha subunit, Gram-positive type6e-1995.1
NC_012658:2584355:2611499261149926157974299Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA polymerase III PolC5e-1995.1
NC_012563:2721658:2727878272787827321764299Clostridium botulinum A2 str. Kyoto, complete genomeDNA polymerase III, alpha subunit, Gram-positive type7e-1994.7
NC_012438:1514376:152834415283441528961618Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA polymerase III PolC-type (PolIII)9e-1994.4
NC_013169:1661135:1661135166113516628891755Kytococcus sedentarius DSM 20547, complete genomeexonuclease, DNA polymerase III, epsilon subunit family1e-1894
NC_014210:3742112:3757353375735337591401788Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, epsilon subunit2e-1893.6
NC_020911:1859210:186344118634411864049609Octadecabacter antarcticus 307, complete genomeputative exonuclease6e-1891.7
NC_017294:758992:7723037723037764964194Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA polymerase III PolC7e-1891.3
NC_010079:2102856:212460221246022125534933Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible exodeoxyribonuclease9e-1890.9
NC_014836:993448:100898610089861009495510Desulfurispirillum indicum S5 chromosome, complete genomeDNA-directed DNA polymerase3e-1789.4
NC_014215:142500:1530751530751546431569Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,DNA polymerase9e-1787.8
NC_005945:3359598:337683333768333377780948Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit epsilon9e-1787.8
NC_012778:841934:8669008669008714414542Eubacterium eligens ATCC 27750, complete genomeDNA polymerase III subunit alpha, the Gram-positive type2e-1686.3
NC_013037:6209424:621973662197366220260525Dyadobacter fermentans DSM 18053, complete genomeDNA polymerase III, epsilon subunit3e-1685.9
NC_007517:3430237:345016934501693450825657Geobacter metallireducens GS-15, complete genomeDNA polymerase III, epsilon subunit3e-1685.9
NC_015589:1899329:1899329189932919036064278Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase III subunit alpha4e-1685.5
NC_021182:4829000:4832933483293348372764344Clostridium pasteurianum BC1, complete genomeDNA polymerase III, alpha chain2e-1583.2
NC_020453:896458:9170169170169191782163Agromonas oligotrophica S58 DNA, complete genomehypothetical protein3e-1582.4
NC_009613:1337536:138110613811061381588483Flavobacterium psychrophilum JIP02/86, complete genomeDNA polymerase III, epsilon subunit6e-1581.6
NC_015671:1540860:1558211155821115600791869Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA polymerase III subunit epsilon7e-1581.3
NC_015588:1965787:1967662196766219693981737Isoptericola variabilis 225 chromosome, complete genomeDNA polymerase III, epsilon subunit8e-1581.3
NC_015731:2460248:2460248246024824616391392Nitrosomonas sp. Is79A3 chromosome, complete genomeDNA polymerase III subunit epsilon1e-1480.5
NC_014387:1175927:1178121117812111827104590Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeDNA polymerase III C PolC12e-1480.1
NC_015514:2414617:2418229241822924200911863Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA polymerase III subunit epsilon4e-1479
NC_014151:2312000:2313921231392123158161896Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, epsilon subunit7e-1478.2
NC_004578:5269194:526919452691945269808615Pseudomonas syringae pv. tomato str. DC3000, complete genomeexonuclease, putative1e-1377
NC_011958:976500:9828219828219844371617Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein2e-1376.6
NC_013515:347671:3919693919693963664398Streptobacillus moniliformis DSM 12112, complete genomeDNA polymerase III, alpha subunit4e-1375.9
NC_002939:1505701:151169815116981512243546Geobacter sulfurreducens PCA, complete genomeexonuclease4e-1375.5
NC_012526:2155947:215999921599992160607609Deinococcus deserti VCD115, complete genomeputative DNA-directed DNA polymerase (DNA polymerase III, epsilon subunit)1e-1274.3
NC_006448:59654:7279172791771854395Streptococcus thermophilus LMG 18311, complete genomeDNA polymerase III subunit alpha1e-1274.3
NC_006449:58436:7157471574759684395Streptococcus thermophilus CNRZ1066, complete genomeDNA polymerase III subunit alpha1e-1274.3
NC_015760:61345:7446974469788634395Streptococcus salivarius CCHSS3, complete genomeDNA polymerase III polC-type (PolIII)1e-1273.9
NC_015222:2475792:2494021249402124954121392Nitrosomonas sp. AL212 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-1273.6
NC_015572:2186394:2188322218832221897221401Methylomonas methanica MC09 chromosome, complete genomeDNA polymerase III subunit epsilon2e-1273.6
NC_012471:781063:7810637810637835342472Streptococcus equi subsp. equi 4047, complete genomeATP-dependent DNA helicase3e-1272.8
NC_015381:1318818:133573613357361336347612Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA polymerase III subunit epsilon3e-1272.8
NC_008609:2518993:253566125356612536173513Pelobacter propionicus DSM 2379, complete genomeDNA-directed DNA polymerase5e-1272
NC_005945:1459357:1473943147394314767472805Bacillus anthracis str. Sterne, complete genomeATP-dependent DNA helicase1e-1170.9
NC_007530:1459412:1473989147398914767932805Bacillus anthracis str. 'Ames Ancestor', complete genomeATP-dependent DNA helicase1e-1170.9
NC_009782:1327340:1331601133160113359174317Staphylococcus aureus subsp. aureus Mu3, complete genomeDNA polymerase III alpha chain PolC-type1e-1170.9
NC_002952:1291444:1295705129570513000214317Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA polymerase III PolC-type1e-1170.9
NC_004461:921364:9423929423929467204329Staphylococcus epidermidis ATCC 12228, complete genomeDNA polymerase III, alpha chain PolC-type1e-1170.9
NC_007622:1214629:1218890121889012232064317Staphylococcus aureus RF122, complete genomeDNA polymerase III2e-1170.5
NC_017338:1234077:1236038123603812403544317Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA polymerase III subunit alpha2e-1170.1
NC_017341:1291583:1295844129584413001604317Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,DNA polymerase III subunit alpha2e-1170.1
NC_009664:3718927:3738654373865437404591806Kineococcus radiotolerans SRS30216, complete genomeDNA polymerase III, epsilon subunit2e-1170.1
NC_017353:1699652:1711348171134817156644317Staphylococcus lugdunensis N920143, complete genomeDNA polymerase III PolC-type2e-1169.7
NC_007350:1551457:1558499155849915628154317Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,DNA polymerase III alpha chain PolC-type4e-1168.9
NC_012121:897866:9022149022149065274314Staphylococcus carnosus subsp. carnosus TM300, complete genomehomolog of DNA polymerase III, alpha subunit6e-1168.6
NC_014960:1697818:1714903171490317177072805Anaerolinea thermophila UNI-1, complete genomeDnaQ exonuclease/DinG helicase family protein6e-1168.6
NC_021184:2936244:297147929714792972228750Desulfotomaculum gibsoniae DSM 7213, complete genomeexonuclease, DNA polymerase III, epsilon subunit family6e-1168.2
NC_013192:519600:5301375301375345164380Leptotrichia buccalis DSM 1135, complete genomeDNA polymerase III, alpha subunit8e-1167.8
NC_012814:1465738:147026014702601470826567Bifidobacterium animalis subsp. lactis Bl-04, complete genomeDNA polymerase III alpha subunit2e-1067
NC_012815:1465670:147019214701921470758567Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeDNA polymerase III alpha subunit2e-1067
NC_007298:1499344:151363215136321514246615Dechloromonas aromatica RCB, complete genomeDNA polymerase III, epsilon subunit3e-1066.2
NC_017511:602000:602234602234603028795Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative DNA polymerase III subunit3e-1066.2
NC_016628:935420:938432938432938986555Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceDNA polymerase III subunit alpha5e-1065.5
NC_015677:1:204132041321027615Ramlibacter tataouinensis TTB310 chromosome, complete genomeexonuclease protein7e-1064.7
NC_015975:1056731:1056731105673110610804350Lactobacillus ruminis ATCC 27782 chromosome, complete genomeDNA polymerase III PolC3e-0962.8
NC_007333:810381:8326388326388341881551Thermobifida fusca YX, complete genomeexonuclease3e-0962.8
NS_000191:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17, completeDNA polymerase III epsilon subunit4e-0962.4
NC_020419:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeDNA polymerase III epsilon subunit4e-0962.4
NC_015957:3282183:3285931328593132878471917Streptomyces violaceusniger Tu 4113 chromosome, complete genomeDNA polymerase III subunit epsilon2e-0859.7
NC_005295:845000:848673848673849401729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon subunit4e-0859.3
NC_006832:825000:828548828548829276729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon chain3e-0859.3
NC_006831:821000:824448824448825176729Ehrlichia ruminantium str. Gardel, complete genomeDNA polymerase III, epsilon chain3e-0859.3
NC_014366:1663034:167679716767971677699903Gamma proteobacterium HdN1, complete genomehypothetical protein3e-0859.3
NC_014727:1292213:1315998131599813203354338Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii, alpha subunit (gram-positive type) (polc)3e-0859.3
NC_014837:2354241:236160723616072362275669Pantoea sp. At-9b chromosome, complete genomeDNA polymerase III subunit epsilon9e-0857.8
NC_009454:1462930:1466970146697014697832814Pelotomaculum thermopropionicum SI, complete genomehypothetical protein3e-0756.2
NC_015588:939037:9556029556029572151614Isoptericola variabilis 225 chromosome, complete genomeExonuclease RNase T and DNA polymerase III4e-0755.8
NC_009488:1165927:118756911875691188237669Orientia tsutsugamushi str. Boryong, complete genomeDNA polymerase III epsilon chain3e-0755.8
NC_011080:1944226:197669319766931977391699Salmonella enterica subsp. enterica serovar Newport str. SL254,exodeoxyribonuclease 105e-0755.5
NC_008313:2685531:268771026877102688450741Ralstonia eutropha H16 chromosome 1, complete sequenceDNA polymerase III epsilon subunit6e-0755.1
NC_007508:1221500:122526112252611225995735Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeDNA polymerase III subunit epsilon6e-0755.1
NC_011094:1923870:194963319496331950331699Salmonella enterica subsp. enterica serovar Schwarzengrund strexodeoxyribonuclease X6e-0755.1
NC_003197:1945858:197107219710721971770699Salmonella typhimurium LT2, complete genomeexodeoxyribonuclease X6e-0755.1
NC_010531:708049:722835722835723545711Polynucleobacter necessarius STIR1, complete genomeDNA polymerase III, epsilon subunit6e-0755.1
NC_012125:1897611:189969718996971900395699Salmonella enterica subsp. enterica serovar Paratyphi C strainexodeoxyribonuclease X6e-0755.1
NC_016810:1903426:192864019286401929338699Salmonella enterica subsp. enterica serovar Typhimurium strexodeoxyribonuclease X6e-0755.1
NC_016856:1957263:198247719824771983175699Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sexodeoxyribonuclease X6e-0755.1
NC_016857:1903426:192864019286401929338699Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74exodeoxyribonuclease X6e-0755.1
NC_016860:1943203:196661319666131967311699Salmonella enterica subsp. enterica serovar Typhimurium strexodeoxyribonuclease X6e-0755.1
NC_016863:1905454:193066819306681931366699Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1exodeoxyribonuclease X6e-0755.1
NC_017046:1902788:192800319280031928701699Salmonella enterica subsp. enterica serovar Typhimurium str. 798exodeoxyribonuclease X6e-0755.1
NC_017506:2089769:210113921011392101711573Marinobacter adhaerens HP15 chromosome, complete genomeexonuclease RNase T and DNA polymerase III7e-0754.7
NC_011294:1220526:122261412226141223312699Salmonella enterica subsp. enterica serovar Enteritidis strexodeoxyribonuclease X9e-0754.7
NC_011134:311360:313233313233313820588Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeDNA polymerase III polC-type1e-0654.3
NC_006511:1063249:106533710653371066035699Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCexodeoxyribonuclease X1e-0654.3
NC_011147:1057259:105934710593471060045699Salmonella enterica subsp. enterica serovar Paratyphi A strexodeoxyribonuclease X1e-0654.3
NC_007930:130948:141994141994142263270Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,1e-0653.9
NC_007164:822000:830685830685831353669Corynebacterium jeikeium K411, complete genomehypothetical protein1e-0653.9
NC_008314:2686851:270009027000902700752663Ralstonia eutropha H16 chromosome 2, complete sequenceputative exonuclease4e-0652.4
NC_008340:2272692:2275718227571822779072190Alkalilimnicola ehrlichei MLHE-1, complete genomeputative PAS/PAC sensor protein5e-0652
NC_008618:1206157:122169012216901222313624Bifidobacterium adolescentis ATCC 15703, complete genomeputative DNA polymerase III epsilon subunit5e-0652
NC_008321:2569315:258567025856702586398729Shewanella sp. MR-4, complete genomeDNA polymerase III, epsilon subunit1e-0551.2
NC_008322:2637646:265401326540132654741729Shewanella sp. MR-7, complete genomeDNA polymerase III, epsilon subunit1e-0551.2